Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq8 104 2e-17 >seq8 Length=423986 Score = 104 bits (114), Expect = 2e-17 Identities = 245/364 (67%), Gaps = 7/364 (2%) Strand=Plus/Minus Query 50494 GGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCAC 50553 ||| | ||||||||||| |||| |||||| | |||||||| |||||||| ||||| Sbjct 365696 GGCCTCATGCCCGGCCTGTCGTTCTCGAACGAGCTCATTTCGCGTGACGAAGGTCTGCAC 365637 Query 50554 ACAGACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATAC-GAAAC 50612 || |||||||| || | || || | | | || ||| || | || || Sbjct 365636 ACCGACTTTGCCTGCCTCCTCTT---TAGCCACCTGAA-GAAGCGCGCCCACCCCGACAC 365581 Query 50613 AATTTTGGACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTT 50672 | | ||| | | || || || | ||| || | || ||||| || |||||| | Sbjct 365580 AGTGAACCGCATCATTACGGAGGCTGTGGCCATTGAGCAGGACTTTTTGACCGACGCTCT 365521 Query 50673 ACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGC 50732 ||||| | || | ||||||||||| | |||||||| |||||||||||||||| || Sbjct 365520 GCCCGTCTCGCTGATTGGCATGAACGCCCGCCTGATGTGCCAGTACATTGAGTTTGTGGC 365461 Query 50733 AGACAGATTGTTGTTGCAGCTGGGACAACCGAAATACTATAA-TGCACGTAACCCCTTTC 50791 ||| | || | | | || || | || || |||| || | ||| || |||||| Sbjct 365460 CGACCGTCTGCTCGTCAACCTCGGCAACCCTAAGCACTACAACTCGACG-AATCCCTTTG 365402 Query 50792 CGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCG 50851 |||||| | ||||| ||| || ||||||| | ||||||||||| | || || | || Sbjct 365401 ACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTCGCCG 365342 Query 50852 AATA 50855 | || Sbjct 365341 ACTA 365338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014317610160