Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq8 264 2e-65 >seq8 Length=423986 Score = 264 bits (292), Expect = 2e-65 Identities = 584/865 (68%), Gaps = 28/865 (3%) Strand=Plus/Minus Query 124998 TTTCCC-ATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTG 125056 |||||| || | || || || || ||| | |||||||| ||||| ||||||| || || Sbjct 366201 TTTCCCTATTCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCGGAGGCCTCGTTCTG 366142 Query 125057 GACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGA 125116 ||| | |||||| | || ||||| || |||||| |||| ||||| || ||| || Sbjct 366141 GACCGCTGAAGAGATGGACCTGTCGAAAGACCTGCACGACTGGGACCACCGCATGAACGA 366082 Query 125117 AACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGT 125176 | |||||| | ||| | ||| | |||| |||||||||| ||| ||||| ||||| Sbjct 366081 CAATGAGCGCCACTTTGTGAGCCACGTCCTGGCGTTCTTTGCCGCCTCGGATGGCATCGT 366022 Query 125177 CAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCGTGC 125234 ||| || || ||| | || || ||| || || | | |||| ||| Sbjct 366021 CAATGAGAACCTGGTCGAGCGCTTTAGCGCCGAGGTG--CAGGCGGCCGAGGCCCGCTGC 365964 Query 125235 TTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATT 125294 |||||||| || || || ||||| |||||| | |||||||||| |||||| ||||| Sbjct 365963 TTTTACGGCTTTCAGATTATGATGGAGAACATTCACTCGGAAACGTACTCGCTCCTGATC 365904 Query 125295 GACATGTACATTCGCGATCCGCAACGTAAACACATG---CTCTTTAACGCAATCGACACG 125351 |||| ||||| || || ||| | | | | | | |||||||| || ||||| ||| Sbjct 365903 GACACCTACATCCGTGAGCCGGAGC---AGCGCGAGTATCTCTTTAATGCGATCGAGACG 365847 Query 125352 GTGCC-GTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTC 125410 | || ||| | | |||| ||| | |||| | || |||||| ||| | | Sbjct 365846 ATCCCCGTCGTCAAGCAAAA-GGCCGACTGGGCCCTGCGCTGGATCTCGGACAAGCGTGC 365788 Query 125411 TTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAG 125470 |||| | | || | || ||||| || || ||||| ||||| ||||| || |||||| Sbjct 365787 CTCGTTCTCGGAGCGCCTTGTGGCTTTTGCAGCCGTGGAGGGTATCTTTTTCTCGGGTTC 365728 Query 125471 TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAA 125530 |||||| | ||||| |||||||||||||| || ||||||||||| ||| || | || Sbjct 365727 GTTTGCGTCGATCTTCTGGCTCAAGAAGCGGGGCCTCATGCCCGGCCTGTCGTTCTCGAA 365668 Query 125531 CGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAA 125590 |||| | || || || ||||| || || ||| ||||||||| || || ||| || | Sbjct 365667 CGAGCTCATTTCGCGTGACGAAGGTCTGCACACCGACTTTGCCTGCCTCCTCTTTAGCCA 365608 Query 125591 C---TATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGA 125647 | | ||| || | | || ||| |||| | ||||| | || || Sbjct 365607 CCTGAAGAAGCGCGCCCA-CCCCGACACAG---TGAACCG--CATCA------TTACGGA 365560 Query 125648 TGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCAT 125707 || ||| || || || || ||| | ||||| | || || ||| |||||||||| Sbjct 365559 GGCTGTGGCCATTGAGCAGGACTTTTTGACCGACGCTCTGCCCGTCTCGCTGATTGGCAT 365500 Query 125708 GAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTT 125767 |||| | || |||||| ||||||| ||||||||||| || ||||| || | | | Sbjct 365499 GAACGCCCGCCTGATGTGCCAGTACATTGAGTTTGTGGCCGACCGTCTGCTCGTCAACCT 365440 Query 125768 GATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACT 125827 || ||| |||||| | | |||||||||||| || ||| | ||| || || Sbjct 365439 CGGCAACCCTAAGCACTACAACTCGACGAATCCCTTTGACTTTATGGAGAACATTTCGCT 365380 Query 125828 AGAGGGTAAGACCAACTTTTTCGAG 125852 |||| ||| | |||||||||||| Sbjct 365379 GCAGGGCAAGTCGAACTTTTTCGAG 365355 Score = 223 bits (246), Expect = 5e-53 Identities = 391/560 (70%), Gaps = 12/560 (2%) Strand=Plus/Plus Query 96831 GTGCCAATGCTCAGAATGTACAATGCAATGTCACGA--TACGTTACACAGGGCGGCAATA 96888 ||||| ||||| | ||||||| |||| | || ||||| ||||||||||| | Sbjct 377822 GTGCCCATGCTTCGTGTGTACAA--CAATACCGCGCGCTACGTGGATCAGGGCGGCAACA 377879 Query 96889 AACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTA 96948 | || |||||||| | ||| | ||| |||| || |||||| |||| || ||||| |||| Sbjct 377880 AGCGCCCAGGCGCCTTTGCCATTTACCTGGAGCCCTGGCACTCGGATGTGTTTGAATTTA 377939 Query 96949 TCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCAC 97008 |||| ||||||| ||| ||| ||||| | || || | |||||||| || | Sbjct 377940 TCGACCTGCGCAAGAACCACGGCAAGGAAGAAGTGCGCGCACGCGACTTGTTCCTCGCGC 377999 Query 97009 TCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGT 97068 | ||| | || || |||| ||| ||||| | | ||| ||||| || |||| Sbjct 378000 TGTGGATCCCCGACCTGTTTATGCGTCGCGTTGAGCAGAATGGGGACTGGTCGCTGATGT 378059 Query 97069 GCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACA 97128 |||| | | || ||||||||||| || |||| ||||| |||||||| || |||| Sbjct 378060 GCCCTGCCGAGTGCCCCGGTCTGTCTGACTGCTATGGCGAGGAGTTTGAAGCTTTGTACG 378119 Query 97129 CGGCCTACGAGCAAGAGGGCCGATACGTGAGACG---AGTCGATGCACGAGAA-CTGTGG 97184 | ||||||| ||||| || | | | || || ||| | || | |||| ||||| Sbjct 378120 AGCGTTACGAGCGTGAGGGGCG-TGC-TAAG-CGCTCTGTCAAGGCGC-AGAAGTTGTGG 378175 Query 97185 AAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACC 97244 | ||||| || ||| ||| | ||||| || | ||||| ||| || |||||||| | Sbjct 378176 TACGCCATTTTGGAGGCCCAGATTGAGACGGGTAATCCGTTCATCCTGTACAAGGACTCG 378235 Query 97245 GTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACG 97304 | || ||||| |||||||| || ||||||| || ||| ||||||| |||||||| Sbjct 378236 GCCAACCGCAAGAGCAACCAGAAGAACCTGGGCACAATTAAGAGCTCCAACCTGTGCACC 378295 Query 97305 GAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAAT 97364 || || | |||||| ||| ||||| |||||||| || ||| ||||| ||| || | Sbjct 378296 GAGATCATCGAGTACAGCTCGCCGGAAGAGACGGCCGTATGCAACCTGGCCTCGATCGCT 378355 Query 97365 CTGCCCAAGTTTGTAGAGGG 97384 ||||| | |||| | || || Sbjct 378356 CTGCCGACGTTTATTGAAGG 378375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059079577880