Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq6 158 2e-34 seq3 113 7e-21 >seq6 Length=615380 Score = 158 bits (174), Expect = 2e-34 Identities = 193/261 (74%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||| || |||| ||||| | || || |||||||| || || |||||||| ||||| Sbjct 175372 GCTAAGCGCCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATTACCAAGCCCGCTAT 175430 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| ||||| |||||||| ||||||||| ||||||| | | || || |||| Sbjct 175431 CCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCTGGTCTCATTTACGACGAGAC 175490 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| ||| ||||| | ||||| ||| |||||||| || | | ||| ||||| Sbjct 175491 TCGTGGTGTCCTGAAGCTGTTCCTTGAGAGCGTTATCCGCGACTCGGTTACCTACACCGA 175550 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || || ||||||||||| || | || | |||| || | || || || || Sbjct 175551 ACACGCCAAGCGCAAGACTGTCACTTCGCTCGACGTGATCTACGCGCTCAAGCGCCAGGG 175610 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 ||| | | || ||||| || Sbjct 175611 CCGCACCCTCTACGGTTTCGG 175631 >seq3 Length=1323904 Score = 113 bits (124), Expect = 7e-21 Identities = 180/256 (70%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| ||| || || || || || || ||||| ||||| ||||| Sbjct 1161880 GCGAAGCGCCACCGCAAGAT-TCTGCGCGACAATATTCAGGGCATCACGAAGCCGGCTAT 1161822 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| ||||||||||| || || |||||| |||| || || | || || |||| Sbjct 1161821 TCGCCGTCTCGCTCGTCGTGGCGGTGTGAAGCGTATCTCGGGTCTGATTTACGACGAGAC 1161762 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || ||||||||| | || | ||| ||| |||| ||| || || || || || Sbjct 1161761 ACGCAGCGTTTTGAAGCTGTTTTTGGAGAGCGTGATCCGTGACTCTGTCACGTACACGGA 1161702 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || || ||||| || || || | || || | || || | || || ||||| Sbjct 1161701 ACACGCCAAGCGCAAGACGGTGACGTCGCTCGACGTCATTTACGCGCTCAAGCGCCAAGG 1161642 Query 16672 CCGTAAGATTTATGGT 16687 || | |||||||| Sbjct 1161641 GCGCACACTTTATGGT 1161626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075188114009