Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq8 143 3e-29 >seq8 Length=423986 Score = 143 bits (158), Expect = 3e-29 Identities = 388/589 (66%), Gaps = 10/589 (2%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || || || ||| ||||||||| ||||| | ||| || ||||| || |||| || Sbjct 365623 CAGGCAAAGTCGGTGTGCAGACCTTCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGG 365682 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| ||||| ||||| || ||||| || || || || || || || || || ||| Sbjct 365683 CCGGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATCGACGCAAACGAACCCGAGAAAAAG 365742 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCT-GTCATG 33479 || || || || || ||||| || | ||| | ||| | | ||| | |||| ||| Sbjct 365743 ATACCCTCCACGGCTGCAAAAGCCACAAGGCGCTC-CGAGAACGAGGCACGCTTGTCCGA 365801 Query 33480 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539 ||||| | ||||| |||||||| | || || || ||||| || || ||||| Sbjct 365802 GATCCAGCGCAGGGCCCAGTCGGCCTTTTGCTTGACGACGGGGATCGTCTCGATCGCATT 365861 Query 33540 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33599 ||||||||| | | | || | || || ||||||| || ||| | Sbjct 365862 AAAGAGATACTCGCGCTGCTCCGGCTCACGGATGTAGGTGTCGATCAGGAGCGAGTACGT 365921 Query 33600 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33659 |||||| |||||||| || || |||||||| ||||| || || | ||||||| Sbjct 365922 TTCCGAGTGAATGTTCTCCATCATAATCTGAAAGCCGTAAAAGCAGCGGGCCTCGGCCGC 365981 Query 33660 CTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGC 33719 ||| || || | | ||| || || ||| || ||||| || || || || ||| || Sbjct 365982 CTGCACCTCGGCGCTAAAGCGCTCGACCAGGTTCTCATTGACGATGCCATCCGAGGCGGC 366041 Query 33720 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTATTCC 33775 ||| ||||||| || || | | ||| | || | || ||| | | | || Sbjct 366042 AAAGAACGCCAGGACGTGGCTCACAAAGTGGCGCTCAT-TGTCGTTCATGCGGTGGTCCC 366100 Query 33776 AATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33835 | || | | ||||| || | || | ||||| | ||||| || || ||||| |||| Sbjct 366101 AGTCGTGCAGGTCTTTCGACAGGTCCATCTCTTCAGCGGTCCAGAACGAGGCCTCCGCCT 366160 Query 33836 TTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 | || ||||| | |||||| || | || | || ||||||| ||||| Sbjct 366161 TCTTGTACATCTGCCAGATCTCGTGGTAGCGAATAGGGAAAAGGACAAA 366209 Score = 134 bits (148), Expect = 2e-26 Identities = 355/535 (66%), Gaps = 8/535 (1%) Strand=Plus/Minus Query 63320 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63379 ||| || ||||| || |||| ||| ||||| | | || || || ||||| || ||||| Sbjct 377926 ATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGCCTGGGCGCTTGTTGCCGCCCTG 377867 Query 63380 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATAT 63439 ||| | ||| | ||||| || || || || | | ||| || | ||||||||| | Sbjct 377866 ATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCATGGGCACAATACCGTTACTCAC 377807 Query 63440 ACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTAT 63499 || || || || | || || || | |||||||| || || || || || Sbjct 377806 GCCGTTTGTGCCAGCAATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAGGCCAAT 377747 Query 63500 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTCATAGATACCCTCTA 63558 || || ||| | || ||||| | || || ||| || | ||||||||| || ||||| | Sbjct 377746 GCCACCGGCCGTCTTGGAGATCATGGCACA-CGTCTTGAGCGTGTCATAAATGCCCTCAA 377688 Query 63559 TGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 63618 | ||| || |||| | | || || || ||||| || | | || |||| Sbjct 377687 TCGAATCGTCCTTCATACTGACAAGGAAGCACGACGACATCTGAGGGTGGGGCGTACCCG 377628 Query 63619 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA-GTAGATTGTACGTC 63677 |||| || | ||| || || |||||||| || || || || | |||| ||||||||| Sbjct 377627 CATTGAACAGGGTTGGCGACGCGTGCGTGAAAGCCTTCTCGGACATGTAG-TTGTACGTC 377569 Query 63678 TCAATAGCTGAGTCT--ATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 63735 ||||| || | ||| |||||| || || || || || |||||||| | ||||| Sbjct 377568 TCAATGGC--ACTCTTGATATCCTCGCCGTGGATACCAACAGCCACACGCATGAGCATGT 377511 Query 63736 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 63795 ||||||| | || | | ||| ||| || || || ||| || || | || | Sbjct 377510 GCTGAGGGCGCTCGGCAACCTTACCGTTGATCCGCAGCAGGTAAGAGCGCTCAAGCGTCT 377451 Query 63796 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850 | || || ||| ||||||| |||||| || |||||||| | | |||||| ||| Sbjct 377450 TGAATCCGAAAAAGTTGTAGTGAAAGTCGCGCTCGTAAATGACAGCCGAGTCGAG 377396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947098771080