Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq8 212 6e-50 seq4 111 1e-19 seq6 109 5e-19 seq1 95.1 1e-14 >seq8 Length=423986 Score = 212 bits (234), Expect = 6e-50 Identities = 320/453 (71%), Gaps = 9/453 (2%) Strand=Plus/Minus Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 ||| | ||||| | ||||| ||||| |||||||| ||||||| || || ||| Sbjct 365783 TTCTCGGAGCGCCTTGTGGCTTTTGCAGCCGTGGAGGGTATCTTTTTCTCGGGTTCGTTT 365724 Query 46207 GCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAG 46266 || | ||||| | |||| | |||| |||||||||||||| |||| |||||| Sbjct 365723 GCGTCGATCTTCTGGCTCAAGAAGCGGGGCCTCATGCCCGGCCTGTCGTTCTCGAACGAG 365664 Query 46267 CTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGC 46326 || || ||||| ||||| || ||||| || |||||||| || ||| || || | | | Sbjct 365663 CTCATTTCGCGTGACGAAGGTCTGCACACCGACTTTGCCTGCCTCCTCTTTAGC---CAC 365607 Query 46327 GTGCACGACAAGCTTGC---GCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCC 46383 || | |||| || |||||||| ||| |||| | | |||||| |||||| Sbjct 365606 CTG---AAGAAGCGCGCCCACCCCGACACAGTGAACCGCATCATTACGGAGGCTGTGGCC 365550 Query 46384 ATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAG 46443 |||||| |||| ||||| || | ||| ||||||| | ||| | ||||||||||| | Sbjct 365549 ATTGAGCAGGACTTTTTGACCGACGCTCTGCCCGTCTCGCTGATTGGCATGAACGCCCGC 365490 Query 46444 TCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCG 46503 |||||| | ||||| |||||||| || ||||| |||||||| | || | | || Sbjct 365489 CTGATGTGCCAGTACATTGAGTTTGTGGCCGACCGTCTGCTCGTCAACCTCGGCAACCCT 365430 Query 46504 AAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAA 46563 ||||| | || || ||||| ||||| |||||| | ||||| || ||| ||||||| Sbjct 365429 AAGCACTACAACTCGACGAATCCCTTTGACTTTATGGAGAACATTTCGCTGCAGGGCAAG 365370 Query 46564 ACTAATTTTTTCGAAAAGCGCGTCGGCGAGTAT 46596 | || |||||||| ||||||| ||| ||| Sbjct 365369 TCGAACTTTTTCGAGCGCCGCGTCGCCGACTAT 365337 Score = 140 bits (154), Expect = 3e-28 Identities = 976/1538 (63%), Gaps = 93/1538 (6%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| |||||||| |||| ||| ||||||| || | ||| |||| |||| Sbjct 378927 TTGACCACCTGGAACTCGCCAGCCAGCACGCGACGCATGTAAATGTTGCTCGTGTAGGGC 378868 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| |||||||| ||| ||||| || |||| || || ||||| |||| Sbjct 378867 TCAAAGCACTCGTTAAAGCCAAGGATCTGGCTCGTCGAGGCTGTCGGCATCGGTGCCATG 378808 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||| || ||||||| || | |||| |||| |||||||||| Sbjct 378807 AGCAGCGAGTTGCGAAGACCGTGCTGTGCAATCTGGGCCTTGAGCGAGGTCCAATCCCAT 378748 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || ||||| | || ||||||||| || ||||||| ||||| ||| || ||| Sbjct 378747 AGGTCCGTCGGTGTGCGGTTCCACATGTCATATTGCAAAAGGCCCTGCGAGGCAGGACTG 378688 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGCG 145357 || | ||| ||| ||| | || |||||||| || ||| || || Sbjct 378687 CCCTCGTAGGTCTCGTAGGGGCCGTACTCGGCCGCCAGCTCGCAGCTGCGCTCAAGGGCT 378628 Query 145358 CCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTAC 145417 | || |||||||| |||||| ||| || || || || | ||| || || Sbjct 378627 GCATGGTAGATTGTCTCAAATATTTGCACGTTCAGGAGACGAGCCTCCTGGCTGTCAAAC 378568 Query 145418 GGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGA 145477 || || || | | |||||| || || || ||||| | || | |||||||| || Sbjct 378567 GGATAGCCCATGATCATAAAAGCGTCCGCCAGGCCCTGAACACCGATACCGATGGGGCGG 378508 Query 145478 TGTTTCATGTT-GCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTTT 145536 || ||| || | | | | || ||| | || || ||| |||||| || Sbjct 378507 TGGCGCATATTCGAGCGACGT-GCGCTCTCCACGGGGTAGTAGTTAATGTCGATGATGCG 378449 Query 145537 ATTCAAGTT-TCGCACTACTACCTTTG---TAATGTGC---CGC---AACTTTTCAAAGT 145586 |||| ||| | |||| || ||||| | | |||| ||| || || | | || Sbjct 378448 GTTCAGGTTCTTGCAC-ACCACCTTCGACACATCGTGCAGGCGCTGGAAGTTGT--ACGT 378392 Query 145587 C--AAAC---CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATT 145641 | || | || | |||| | | | || | |||||||| |||| || Sbjct 378391 CTTGGACGCGCCAGTGCCTTCAATAAAC-GTCGGC-----AGAGCGATCGAGGCCAGGTT 378338 Query 145642 ACAAACTGCCGTCTCCT-CGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTAC 145700 || || |||||||| | ||||| |||||| | | |||||||| ||||| ||| | Sbjct 378337 GCATACGGCCGTCTCTTCCGGCG-AGCTGTACTCGATGATCTCGGTGCACAGGTTGGAGC 378279 Query 145701 ATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760 || || || ||||| || | ||| || || || | |||| || ||||||||| || | Sbjct 378278 TCTTAATTGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCCGAGTCCTTGTACAGGA 378219 Query 145761 TGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTG-----CAAGTCCTG 145815 || |||| || ||||| | ||| | |||| |||| || | ||| | ||| Sbjct 378218 TGAACGGATTACCCGTCTCAATCTGGGCCTCC-----AAAATGGCGTACCACAACTTCTG 378164 Query 145816 CGCACGCACCTGCTGCTGGTAG--CGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCA 145873 ||| || ||| ||| || ||||| ||||| | ||| | | ||| Sbjct 378163 CGCCTTGACAGAGCGCT--TAGCACGCCCCTCACGCTCGTAACGCTCGTACAAAGCTTCA 378106 Query 145874 AACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCAT 145933 ||| | || ||||| || ||||| ||||| |||| | || |||||||||||||| Sbjct 378105 AACTCCTCGCCATAGCAGTCAGACAGACCGGGGCACTCGGCAGGGCACATCAGCGACCAG 378046 Query 145934 ACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAG 145993 | || || | ||||| |||||||| || || | |||||||||| | |||| Sbjct 378045 TCCCCATTCTGCTCAACGCGACGCATAAACAGGTCGGGGATCCACAGCGCGAGGAACAAG 377986 Query 145994 TCGCGCGCTTTGCAATCCTCAGCACCCATGTTTC--GC----TTC---AAATT-AAGCAC 146043 ||||| || ||| | || || || ||| || || ||||| || ||| Sbjct 377985 TCGCGTGC-GCGCACTTCTTCCTTGCCGTGGTTCTTGCGCAGGTCGATAAATTCAAACAC 377927 Query 146044 ACTATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTT 146100 | |||| |||||| || || | || | ||| | ||| ||| || || Sbjct 377926 A---------TCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGCCTGGGCGCTTGTT 377876 Query 146101 GCCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCC 146160 ||| ||||| ||||||| || | | ||||| | || || | ||||||| | | || Sbjct 377875 GCCGCCCTGATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCATGGGCACAATACC 377816 Query 146161 GCTGGCTACGCCGTTCGT---AG-AGTTTATTCTGGTGCCGCGGGAGCGCACGCA----A 146212 | | |||||||| || || | | || | ||| || |||||| | Sbjct 377815 GTTACTCACGCCGTTTGTGCCAGCAATGTA----CGAGCC-CG---TCGCACGAATGTTG 377764 Query 146213 TGAACATTCACGCCGAGACCGCC-GCCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCG 146270 || | |||| ||| | || || ||||| |||||| || ||| || ||| ||||| Sbjct 377763 TGGATGTTCAGGCCAATGCCACCGGCCGT-CTTGGAGATCATGGCACACGTC-TTGAGCG 377706 Query 146271 TCTCGTAGATGCCGTCAATGCTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACAT 146328 | || || ||||| ||||| |||| |||| || | || || |||||||| |||| Sbjct 377705 TGTCATAAATGCCCTCAATCGAATCGTCCTTC--ATACTGACAAGGAAGCACGACGACAT 377648 Query 146329 CTGCGCCATCGGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGT-AAACATTTTTC 146387 ||| | ||||| ||||| ||||| || || ||||||||| ||| || || Sbjct 377647 CTGAGGGTGGGGCGTACCCGCATTGAACAGGGTTGGCGACGCGTGCGTGAAAGCCTTCTC 377588 Query 146388 GGCTCATCATCCGATACGTTTCGATAGC-GTCTTGAATGTCGTCGCCATGAATGCCCAAA 146446 || ||| ||||| || || || ||||| || || ||||| || || || | | Sbjct 377587 GG-ACATGTAGTTGTACGTCTCAATGGCACTCTTG-ATATCCTCGCCGTGGATACCAACA 377530 Query 146447 GCGACGCGCATGAGCATGTGTTGGGGCCGCTCCGCCACTTGATTGTCAATCTTTAACAAA 146506 || || |||||||||||||| || || ||||| || || | | || ||| | || Sbjct 377529 GCCACACGCATGAGCATGTGCTGAGGGCGCTCGGCAACCTTACCGTTGATCCGCAGCAGG 377470 Query 146507 TAGCCGTTCTCCAGGGTTTTGTATCCGAAAAATTTGTA 146544 || | ||| || || ||| |||||||||| ||||| Sbjct 377469 TAAGAGCGCTCAAGCGTCTTGAATCCGAAAAAGTTGTA 377432 >seq4 Length=1186707 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| | || | ||| |||||| ||||||||||| ||||||| ||| || | Sbjct 399078 CGAAGCACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCG 399019 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| |||||||| || ||| |||| | |||||| |||||||| ||||| || || ||| Sbjct 399018 TCCTCGAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTG 398959 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||||| | || | || || | ||| || | || | || | Sbjct 398958 TCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGATTCAACCTCAAGCGTGATC 398899 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || || || || ||||| || ||||| || |||||| Sbjct 398898 GTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 398863 >seq6 Length=615380 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| | || | || |||||| || |||||||| |||||| Sbjct 241335 CCACCACGCAGACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 241394 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| | ||||| |||||||| ||| Sbjct 241395 AGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGG 241454 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | ||| | || |||| ||||| | Sbjct 241455 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 241514 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | || || ||||| || || || ||||| | |||||| Sbjct 241515 TCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTGACGAACACTTGCATG 241562 Score = 96.9 bits (106), Expect = 3e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 131004 TGAGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC 131063 || ||||||||||||||| ||||| | ||| | || |||||| ||||| ||||| || Sbjct 150937 TGCGCCACCGCGCAAACGAAGCACGAGATGGAGCGTGCTCTCCTTCTGAATATTGTAGTC 150878 Query 131064 GCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGG 131123 |||| || || ||||| |||||||| || || | || | || || |||||||| Sbjct 150877 ACTCAATGTTCGTCCATCCTCCAGCTGCTTTCCCGCAAAAATCAGGCGTTGTTGGTCCGG 150818 Query 131124 AGGGATTCCTTCTTTGTC 131141 ||||||||||| ||||| Sbjct 150817 TGGGATTCCTTCCTTGTC 150800 >seq1 Length=1489088 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | |||||||| | || | || |||||| || |||||||| ||||| Sbjct 496504 GCCACCACGAAGGCGCAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCT 496563 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || ||| || ||||||||||| ||| |||| | |||||| ||||||||||| Sbjct 496564 CAGCGTACGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCCGGAGG 496623 Query 131127 GATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 496624 AATGCCCTCCTTGTC 496638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012723297920