Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq6 116 3e-21 seq1 86.0 5e-12 seq4 84.2 2e-11 >seq6 Length=615380 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||| | || || ||||| ||||||| || | ||||| | || |||||||| || Sbjct 241561 ATGCAAGTGTTCGTCAAGACCCTGACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 241502 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| ||||| || ||| ||||| || || || || || |||||| Sbjct 241501 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 241442 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||||||||| || | || |||| ||||||| || |||| ||||| Sbjct 241441 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTGAGCGACTACAAC 241382 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||| || || | ||||| Sbjct 241381 ATCCAGAAGGAGAGCACTCTTCACCTTGTGCT 241350 >seq1 Length=1489088 Score = 86.0 bits (94), Expect = 5e-12 Identities = 128/179 (72%), Gaps = 6/179 (3%) Strand=Plus/Minus Query 25035 ATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACT 25091 ||||| | ||||| |||||||| ||||| || || || || | || |||| ||| Sbjct 496695 ATCACGCTGGAAGTCGAGTCGTCGGACACGATTGA--CAATGTCAAGGCCAAAATTCAG- 496639 Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 ||||| || || ||||| || ||||||||||| | || || |||||||| || | ||| Sbjct 496638 GACAAGGAGGGCATTCCTCCGGACCAACAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAA 496579 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || | || || || |||| ||||| || || || || |||||| || | ||||| Sbjct 496578 GACGGCCGTACGCTGAGCGACTACAACATCCAGAAGGAGAGCACGCTTCACCTCGTGCT 496520 >seq4 Length=1186707 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| |||| || || | ||||| | || || || || || Sbjct 398864 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTTGAGGTTGAATCCTCA 398923 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| || || || || || |||| Sbjct 398924 GACACGATCGA--CAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACC 398981 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || ||||| || || | || || | || || || |||| |||| Sbjct 398982 AACAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGTACCCTGAGCGACTACA 399041 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | ||||| || || ||| || || | ||||| Sbjct 399042 ACATTCAGAAGGAGAGCACCCTGCACCTCGTGCT 399075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327931344595