Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq8 170 4e-37 seq6 125 1e-23 seq4 125 1e-23 seq3 95.1 2e-14 >seq8 Length=423986 Score = 170 bits (188), Expect = 4e-37 Identities = 569/867 (66%), Gaps = 29/867 (3%) Strand=Plus/Plus Query 9963 ACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCTCCATGAAGTCAAAG 10022 || ||||||||||| ||||| |||||||||| || |||||| |||||| ||||||||| Sbjct 365347 ACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCATAAAGTCAAAG 365406 Query 10023 GGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGTGCTG-TGAAAATGCGGTCAGCCAC 10081 || ||| | | | ||||| |||| ||||| | || || | ||||| ||||| Sbjct 365407 GGATTCGTCGAGTTGTAGTGCTTAGGGTTGCCGAG-GTTGACGAGCAGACGGTCGGCCAC 365465 Query 10082 GAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAATCATGCG-GCAGGGGATGG 10140 ||||| |||||||||| ||||||| | |||||||||||||| ||| | ||| | | Sbjct 365466 AAACTCAATGTACTGGCACATCAGGCGGGCGTTCATGCCAATCA-GCGAGACGGGCAGAG 365524 Query 10141 CGTCG--CAAATGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGACGATGCTCTTTACCAC 10198 ||||| |||| ||||||| || |||| || || ||| | ||||| || || Sbjct 365525 CGTCGGTCAAA--AAGTCCTGCTCAATGGCCACAGCCTCCGTAATGATGCGGTTCACTGT 365582 Query 10199 GTCAAGGGACAGCTTG-TTCTCGAGCTTCGAATACAGGAGCTCTCCAAACTGCTGGTGGA 10257 ||| ||| || | |||| || | | | ||||| |||| | ||| | Sbjct 365583 GTC-GGGGTGGGCGCGCTTCTTCAGGTGGCTAAAGAGGAGGCAGGCAAAGTCGGTGTGCA 365641 Query 10258 GGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCCCCGGT 10317 | || ||||| || |||| |||||| || || ||| ||||||||||| ||||| | Sbjct 365642 GACCTTCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGGCCGGGCATGAGGCCCCGCT 365701 Query 10318 TGCGCAGCCAGAAAAT-GGCGCAGAACGACCCGGAGAACAGAAGACCCTCCACGCACACC 10376 | |||||||| || | |||| ||||| || ||||| | | |||||||||| | Sbjct 365702 TCTTGAGCCAGAAGATCGACGCA-AACGAACCCGAGAAAAAGATACCCTCCACGGCTGCA 365760 Query 10377 CAGGCGACGAGGCGCTCTGCGAAGGAG---CGGTCGCGCGAAAAGTATTTCGAGGCCCAC 10433 | || || |||||||| | ||| ||| || | | ||| | | | |||||| Sbjct 365761 AAAGCCACAAGGCGCTCCGAGAACGAGGCACGCTTGTCCGAGATCCAGCGCAGGGCCCAG 365820 Query 10434 GCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCCTCGAAGAGCTTGTTACGCTCG 10493 | ||||| | ||| | |||||||||||||| || | ||||| | | |||| Sbjct 365821 TCGGCCTTTTGCTTGACGACGGGGATCGTCTCGATCGCATTAAAGAGATACTCGCGCT-- 365878 Query 10494 GTCTCGTCCTCA---ATAAGAGCATCAAGGAGCAGGGAGTATTGCTCGCTGTGGACGCTC 10550 ||| |||| || | || | || || ||||| || ||| | | || Sbjct 365879 -GCTCCGGCTCACGGATGTAGGTGTCGATCAGGAGCGAGTACGTTTCCGAGTGAATGTTC 365937 Query 10551 T-CATTGTACCCCTGGTAAGCGTAGAACATACGTGCCGAGGGGTCCGTGACTTCCTCGGC 10609 | ||| || ||| | |||| || || ||| || || || || || Sbjct 365938 TCCATCATA-ATCTGAAAGCCGTAAAAGCAGCGGGCCTCGGCCGCCTGCACCTCGGCGCT 365996 Query 10610 AAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGAT 10669 |||| | | ||||||||| | || |||||||| | | |||||||| | |||| Sbjct 365997 AAAGCGCTCGACCAGGTTCTCATTGACGATGCCATCCGAGGCGGCAAAGAACGCCAGGAC 366056 Query 10670 GTGCTTGATGAAGTGGCGCTCATCATCGTTCA---GTTTTTCACGCCAGTCTACCACATC 10726 ||| | | ||||||||||||| ||||||| | | || |||||| || || Sbjct 366057 GTGGCTCACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGTC---CCAGTCGTGCAGGTC 366113 Query 10727 CTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 | || | | ||| || |||||||||| | ||| | ||||||||||||||||| Sbjct 366114 TTTCGACAGGTCCATCTCTTCAGCGGTCCAGAACGAGGCCTCCGCCTTCTTGTACATCTG 366173 Query 10787 GAAAATGTCGGGGTACCGGATGGGGAA 10813 | || ||| |||| || || ||||| Sbjct 366174 CCAGATCTCGTGGTAGCGAATAGGGAA 366200 >seq6 Length=615380 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||| ||| || |||||||| || ||| Sbjct 241335 CCACCACGCAGACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 241394 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| ||||| || || || | |||||||| || || Sbjct 241395 AGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGG 241454 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||||| || |||||| ||||| | || || || Sbjct 241455 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 241514 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || || |||||||||||||| | ||||| Sbjct 241515 TCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTGACGAACACTTGCAT 241561 >seq4 Length=1186707 Score = 125 bits (138), Expect = 1e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || ||| ||| || || ||||| || ||| || || | || || || | ||| Sbjct 399067 GTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCCTCGAGCTG 399008 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| |||||||| || || | |||||||| || || || || |||||||| || ||||| Sbjct 399007 CTTACCGGCGAAGATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT 398948 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 |||||||| ||||| ||||||| ||||| || || | ||||| || || || || Sbjct 398947 GGCCTTGACATTGTCGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTCTTGCCAGT 398888 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 || ||||||||||| || ||||| Sbjct 398887 CAGAGTCTTGACGAAGATTTGCAT 398864 >seq3 Length=1323904 Score = 95.1 bits (104), Expect = 2e-14 Identities = 656/1039 (63%), Gaps = 46/1039 (4%) Strand=Plus/Plus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || ||||| | ||||||| ||| ||| |||||||||| | ||||| |||||||| Sbjct 378008 TAACGCCAGAGCATGTACTCCAAGGGCGTCTTGTCCAGGTGCTGGTCAATGTGGTGGAAC 378067 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || ||||| || || || | || || |||||| |||||||||| | ||||||| Sbjct 378068 GCGTGCTGAGCGACATAACCAATCACCAGGTTGGGGTGCTTCCACA-ACTCACCCGAGTT 378126 Query 225098 GGT-TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCC 225156 || | | || ||| | || ||||| || || | ||| |||| ||| |||||||| Sbjct 378127 GGGCTCCGTGTCACCGACCACGAGCTTGACCAGGGTCGACTTACCCGAACCGTTGGGGCC 378186 Query 225157 AATCACGCCAATCCGGGATGACATTGCAACCTGC---GAGTT--CACGTTGCTGAAGATC 225211 | ||| | | || || |||| | | |||| || | | || ||||| || | Sbjct 378187 CAGCACAGCCACACGCGACGACAGCGACAGCTGCATCGAAATACCGCGCAGCTGAGGAGC 378246 Query 225212 TCAGG-GCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTT 225270 | ||||| |||| ||| | ||| | |||| ||||| || | ||||| Sbjct 378247 CGGCGTGCCAG---GGTACTGGAAGACGACGTCGCGCATCTTCACGAGCGACTTCTCCTT 378303 Query 225271 GGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCC-- 225328 || | | ||| ||||| | | ||| | ||| | || || | || | || Sbjct 378304 GGTCTTGACACCGTCCAGCAGCGGGGGGTTGGGCAGCTTGAACGAGTAGTCCTCACCCGA 378363 Query 225329 -TTCAGGTCGTAGTAAG-ATGCAGCCTCGGGT---CGCTTTGCCACGAAAGCAGACAGGT 225383 || || ||| ||| | | || || ||||| ||||| || || || |||| Sbjct 378364 GTTGAGCTCGACGTACGCACGC-GCTTCGGGCACACGCTTG---ACAAAGGCGTCGAGGT 378419 Query 225384 TTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTG 225443 | || ||| | ||| ||||| | ||| || | | ||| | | ||||| Sbjct 378420 TACCAGGGTAACGCTTGATCTTGAAGCGGTTCAGGT---GCAGAATGTCGGTACACACGT 378476 Query 225444 CGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGA 225503 ||| ||||| |||||||| ||||| || || || | || ||||| || | | Sbjct 378477 CGTTCAGGAACTTGGAGTCGTGCGACACGATAATCGAGGTGGCGCTCGTCGTGCGCAGGT 378536 Query 225504 GGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAA 225563 || ||| || ||| ||||||||| | ||||||| |||||| || || || || || | Sbjct 378537 AGTCCGTAAT---CCAGGCCACGTTGATCACGTCCAAGTGGTTGGTCGGCTCATCGAGCA 378593 Query 225564 GCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCC 225623 |||| ||||| || | | || | ||| || | || | |||||||| ||||| || | Sbjct 378594 GCAGAATGTCGGCCTTGAACAGAACGGCACGAGCCAGGGCGAGCTTCATCTTCCAACCAC 378653 Query 225624 CGGACAGGGAGCCGATTGAAACAGAGTGCTTAGCT--TCGTCAAAGCCGTACTCCAGGAG 225681 | ||||||| ||||| | | || ||| ||||||||||| ||| || Sbjct 378654 CCGACAGGGCCGTGATTGGTCCGGCCTGGC--GCTGGTCGTCAAAGCCCATCTCGGCCAG 378711 Query 225682 CGTCTG-GATAATG-CGCTCGGGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGAGAGG 225739 |||| || | | | ||| || | | ||| ||| || | || Sbjct 378712 GGTCTTCGACGCCGTCTCGCGGTCGACGTTCAGGCGC-----TTG---TCCTGCTGGATA 378763 Query 225740 TAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTC 225799 | || | || ||||| | || |||| | |||||| || |||||| || Sbjct 378764 AAGTCCAGAATGGAAATGTCACCCTCCGAACCGTCGAGGTCGTGCTCGACGTACCAGGTG 378823 Query 225800 CGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGG 225859 || | || | |||||||||||| | |||||| || || || || | |||| Sbjct 378824 CGCACCTCCTCGGGCGAGGGGAAGCCCTCGACCTGGCCGTTCTGGATGGCGCGCATCAGG 378883 Query 225860 GTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTT--GATGT 225917 || ||| || | ||||| |||| || ||||| | | || ||||| || | Sbjct 378884 GTCGACTTACCGGAACCGTTACGACCACACAGACCGTAGCGGTGGCCACGCTTAAGACGC 378943 Query 225918 TGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGC 225977 ||| || | |||||| || |||||| |||| ||||| || ||||||| ||| | || Sbjct 378944 AGAGTGGCT--GTGTTCAGCAGAATCTTGGCACCGTAGGCGAGCGAGAACTGGCAGTTGC 379001 Query 225978 ACAGGTCCTCACCCTCCTC 225996 ||||||||||||||||||| Sbjct 379002 ACAGGTCCTCACCCTCCTC 379020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622250236360