Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1 102 6e-17 seq6 91.5 1e-13 >seq1 Length=1489088 Score = 102 bits (112), Expect = 6e-17 Identities = 105/135 (78%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || |||||||| || |||||||||||||||||||| |||||||| || || | || || Sbjct 496514 AGGCGCAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGCGTACG 496572 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 |||| |||| ||||||||||| || ||||| ||||| || ||| || | || ||| Sbjct 496573 GCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTC 496632 Query 34029 TTTGTCCATAATTTT 34043 |||||| |||||| Sbjct 496633 CTTGTCCTGAATTTT 496647 >seq6 Length=615380 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/137 (76%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || ||||| || ||||| |||||||||||||| |||||||| || Sbjct 241334 ACCACCACGCAGACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 241393 Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 || | || || | || |||| |||||||||||||| ||||||||||| || ||| | Sbjct 241394 CAGAGTG-CGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGG 241452 Query 34019 GCACGCTCTCTTTGTCC 34035 | | | ||| |||||| Sbjct 241453 GGATACCCTCCTTGTCC 241469 Score = 86.0 bits (94), Expect = 5e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 33913 CGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCG 33972 || ||||| ||||| |||||||||||||||||||| ||||| || |||| ||| | Sbjct 150921 CGAAGCACGAGATGGAGCGTGCTCTCCTTCTGAATATTGTAGTCACTCAATGTTCGTCCA 150862 Query 33973 TCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 || |||| ||||| || ||||| |||||||| || || ||| Sbjct 150861 TCCTCCAGCTGCTTTCCCGCAAAAATCAGGCGTTGTTGGTCC 150820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397062337090426