Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq3 111 3e-19 >seq3 Length=1323904 Score = 111 bits (122), Expect = 3e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 334128 TCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAAC 334187 || || |||||||| ||||| || ||||| || || | || | |||||||| Sbjct 378788 TCCGAACCGTCGAGGTCGTGCTCGACGTACCAGGTGCGCACCTCCTCGGGCGAGGGGAAG 378847 Query 334188 CCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGC 334247 || || | ||| |||||| || ||||||||||| || || ||||| | ||||| | Sbjct 378848 CCCTCGACCTGGCCGTTCTGGATGGCGCGCATCAGGGTCGACTTACCGGAACCGTTACGA 378907 Query 334248 CCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTAT-TGTTCAGAAGAAT 334306 ||||||||||||||||||| |||||||| ||| | | | | | ||||||| ||||| Sbjct 378908 CCACACAGACCGTAGCGGTGGCCACGCTTAAGA-CGCAGAGTGGCTGTGTTCAGCAGAAT 378966 Query 334307 TTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 || |||| || || || || || | || | ||||| |||||||| Sbjct 378967 CTTGGCACCGTAGGCGAGCGAGAACTGGCAGTTGCACAGGTCCTCACC 379014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879816301550