Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq8 122 1e-22 seq3 87.8 2e-12 >seq8 Length=423986 Score = 122 bits (134), Expect = 1e-22 Identities = 175/244 (72%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| ||||| |||||||| || ||||| || |||||||| |||| || Sbjct 365625 GGCAAAGTCGGTGTGCAGACCTTCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGGCC 365684 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||||| ||||||||||| | |||||| |||| ||| ||||||||||| ||||| Sbjct 365685 GGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATCGACGCAAACGAACCCGAGAAAAAGAT 365744 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA-A 126224 |||||||| || || || | || ||||| | || ||| || |||| | | Sbjct 365745 ACCCTCCACGGCTGCAAAAGCCACAAGGCGCTCCGAGAACGAG-GCACGCTTGTCCGAGA 365803 Query 126225 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 126284 ||| || ||||| | ||||||| || || |||| |||| |||||| | || Sbjct 365804 TCCAGCGCAGGGCCCAGTCGGCCTTTTGCTTGACGACGGGGATCGTCTCGATCGCATTAA 365863 Query 126285 AGAG 126288 |||| Sbjct 365864 AGAG 365867 >seq3 Length=1323904 Score = 87.8 bits (96), Expect = 2e-12 Identities = 219/330 (66%), Gaps = 2/330 (1%) Strand=Plus/Plus Query 172576 CTTGAGGAGGGATGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGA 172635 |||||| || ||||| | |||| || || | || | ||| || ||||| ||||| || Sbjct 259350 CTTGAGCAGCGATGGATAAAAGTGGTCGAGGAAGTTGATGATCAGCCCCTTGATGTGGGA 259409 Query 172636 ACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACA-T 172694 ||||| |||| |||||||| ||||| || | || ||||| || || || | Sbjct 259410 GCCATCAAAATCCTGGTCCGTCATGATCATCAGGCTGCCGTAGCGCAGGCCGTCCACGCT 259469 Query 172695 CTTGATACTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGT 172754 | || ||| |||| || || || || |||| || | ||| | | |||| |||| | Sbjct 259470 CGTG-TACACCTTGCCGTGCTGCAGGCCCAGAATTTCCTTAATGTGCTTGATCTCTGCAT 259528 Query 172755 TTGATGTGAGTTGCGCCACTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGA 172814 | ||| ||| | || || || || ||||| |||| || || || || | Sbjct 259529 TCTTCATGATTTGATCGTGAGATGCCTCTCGTACATTGAGCAACTTACCGCGCAGCGGAA 259588 Query 172815 ACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGG 172874 |||||||||| ||||| || ||| | | ||||| ||| || || | ||| || | Sbjct 259589 ACACACCGTACGCGTCACGGCCCACCTCGCTGATACCAGAAACGGCAAGCGCCTTGGCCG 259648 Query 172875 AATCACCCTCCGTCACGATGAGCGTACACT 172904 | ||||| || || | ||| ||||| |||| Sbjct 259649 AGTCACCTTCTGTGAGGATCAGCGTGCACT 259678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353502930040