Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq8 167 2e-36 seq6 95.1 1e-14 seq1 93.3 4e-14 seq4 91.5 1e-13 >seq8 Length=423986 Score = 167 bits (184), Expect = 2e-36 Identities = 302/440 (69%), Gaps = 19/440 (4%) Strand=Plus/Minus Query 47148 GCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATG 47207 ||||| || ||| ||||| |||| |||||||| |||||| |||| || | | Sbjct 365765 GCTTTTGCAGCCGTGGAGGGTATCTTTTTCTCGGGTTCGTTTGCGTCGATCTTCTGGCTC 365706 Query 47208 AAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAA 47267 || | || | ||||||||||| |||| |||||||| || ||| | |||||| Sbjct 365705 AAGAAGCGGGGCCTCATGCCCGGCCTGTCGTTCTCGAACGAGCTCATTTCGCGTGACGAA 365646 Query 47268 GGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAGTCGATCAAAAGTTGGAC 47327 || ||||||||| |||||||||| ||| || ||| | | | ||| | | Sbjct 365645 GGTCTGCACACCGACTTTGCCTGCCTCCTCTT------TAG---CCACCTGAAGAAG--C 365597 Query 47328 GTGCCCACCGT----CAGCGA----CATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGT 47379 | ||||||| ||| || ||| || | || || || ||||||||| ||| | Sbjct 365596 GCGCCCACCCCGACACAGTGAACCGCATCATTACGGAGGCTGTGGCCATTGAGCAGGACT 365537 Query 47380 TTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGT 47439 |||| |||| |||||||||| || | | || |||||||| ||||| | ||| Sbjct 365536 TTTTGACCGACGCTCTGCCCGTCTCGCTGATTGGCATGAACGCCCGCCTGATGTGCCAGT 365477 Query 47440 ACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACA 47499 |||| || ||||| |||||||| |||||||| | || | || ||| ||| || Sbjct 365476 ACATTGAGTTTGTGGCCGACCGTCTGCTCGTCAACCTCGGCAACCCTAAGCACTACAACT 365417 Query 47500 CCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCG 47559 | |||||| || || |||||| | ||||||||||| |||||||| | |||||||||| Sbjct 365416 CGACGAATCCCTTTGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTTTTTCG 365357 Query 47560 AGAAGCGCGTCGGCGAATAT 47579 || ||||||| ||| ||| Sbjct 365356 AGCGCCGCGTCGCCGACTAT 365337 >seq6 Length=615380 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| |||| || |||||| ||| || ||||| || || || | Sbjct 241370 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAA 241429 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||||| ||||| || || || || || |||||||||||| ||| || ||| | | Sbjct 241430 GATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 241489 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||| | | ||| || || | ||| | ||| || |||||||| || || || Sbjct 241490 CTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTGAC 241549 Query 127102 AAAAATCTGCATGGC 127116 || | |||||||| Sbjct 241550 GAACACTTGCATGGC 241564 >seq1 Length=1489088 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||| | || | ||| ||| || || || ||||| |||| | Sbjct 496505 CCACCACGAAGGCGCAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 496564 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| || || || ||||| || || ||| |||||| ||||| || || ||||| Sbjct 496565 AGCGTACGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCCGGAGGA 496624 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||||| ||||| | || | ||||||| ||||||| Sbjct 496625 ATGCCCTCCTTGTCCTGAATTTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACT 496684 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAG 127092 || | || | ||| ||||| || || Sbjct 496685 TCCAGCGTGATCGTCTTGCCAGTGAG 496710 >seq4 Length=1186707 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||| ||||| |||| || || || || || ||||| || || ||| | Sbjct 399055 CTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCCTCGAGCTGCTTACCGGCGAA 398996 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||||| ||||| || || || || || |||||||||||| ||| || ||||| | Sbjct 398995 GATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATT 398936 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||| | || || || | || | ||| ||||| |||||||| || || Sbjct 398935 GTCGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTCTTGCCAGTCAGAGTCTTGAC 398876 Query 127102 AAAAATCTGCATGGC 127116 || || |||||||| Sbjct 398875 GAAGATTTGCATGGC 398861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500722731120