Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq8 145 1e-29 >seq8 Length=423986 Score = 145 bits (160), Expect = 1e-29 Identities = 505/765 (66%), Gaps = 20/765 (3%) Strand=Plus/Minus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902 ||||| |||||||| || || | ||||||| | | | ||| |||||| ||||||| Sbjct 379272 TCCACGGTGAACTGGATCGCCTGTGCGGCAGGGCGCGTGCGCAGGTAGTACGAGCCGGTC 379213 Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTT-TGCTCACGTTGGGGTC 203961 || |||||||||| ||| ||||| | |||||| || | || | | | | ||||||| | Sbjct 379212 TTGAGGCCCTTCTTCCAGCCGTAAAAGTGCATCGACGTAAGCTGTCCAAAGGTTGGGG-C 379154 Query 203962 GGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCA 204020 | ||||||||| ||| |||||| || | |||| |||| || || || |||| Sbjct 379153 ACTTAGGTGAATGTTGAGACTCTGGCTCTGACACACAAAAG-CGCCGCGGTCCGCAGCCA 379095 Query 204021 TATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTGTGT 204079 | | ||| ||| ||| || |||||||||||| ||| || ||| || || || || | Sbjct 379094 TGTCGATGATGACCTTTTGGCTAATCTCCCACACGGTCCTGTACAGCGCCT-TGATGCGG 379036 Query 204080 TGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCAT-CCTCG 204137 | ||| | | | | || || |||||||||| || || || | ||| | | || Sbjct 379035 TCAGG-AATGCCAGCAATGTTCTGGATCGAGCCGCCGTGTGCAAT-AATCTTTTGCTTCA 378978 Query 204138 TCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCT 204197 | || ||| | ||| | | || || || |||| || ||||||| | || Sbjct 378977 TAGAGTCGTTCCAGAGGCCGAGCTCGACGAGTTCGCGCAGGAGCCACGGGTTGACCACCT 378918 Query 204198 GAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCT 204257 | || || || | |||||| | || || | | |||| | ||| | || || || || Sbjct 378917 GGAACTCGCCAGCCAGCACGCGACGCATGTAAATGTTGCTCGTGTAGGGCTCAAAGCACT 378858 Query 204258 CGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGT 204317 |||| ||| | ||||| || ||| || ||||| || |||| |||||| |||| Sbjct 378857 CGTTAAAGCCAAGGATCTGGCTCGTCGAGGCTGTCGGCATCGGTGCCATGAGCAGCGAGT 378798 Query 204318 TGCGCACACCGTATTTTTGGACCCTGCG-CTTCAGAGAGGTCCAGTCGTGCATCG--CAC 204374 |||| | ||||| | || | ||| | ||| || |||||||| || ||| | | Sbjct 378797 TGCGAAGACCGT-GCTGTGCAATCTGGGCCTTGAGCGAGGTCCAATC--CCATAGGTCCG 378741 Query 204375 TGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGT 204434 | ||| | | ||||||||| | || || | ||| || | | || ||||||| || Sbjct 378740 TCGGTGTGCGGTTCCACATGTCATATTGCAAAAGGCCCTGCGAGGCAGGACTGCCCTCGT 378681 Query 204435 ACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTG-ATAG 204493 | ||| || || | ||| | ||||||| ||| | ||| || || || || | Sbjct 378680 AGGTCTCGTAGGGGCCGTACTCGGCCGCCAGCTCGCA-GCTGCGCTCAAGGGCTGCATGG 378622 Query 204494 TACATGGTCTCAAAGATCTGAACGTTTAATCTGGCG-GCCTCCGTTCCGTCAAACGCCAG 204552 || || |||||||| || || ||| || | | || |||||| | |||||||| Sbjct 378621 TAGATTGTCTCAAATATTTGCACG-TTCAGGAGACGAGCCTCCTGGCTGTCAAACGGATA 378563 Query 204553 ACCCAGCATGGCAAACACGTCCGCCAAGCCCTGCACTCCGATTCC 204597 |||| || ||| ||||||||| |||||| || ||||| || Sbjct 378562 GCCCATGATCATAAAAGCGTCCGCCAGGCCCTGAACACCGATACC 378518 Score = 131 bits (144), Expect = 3e-25 Identities = 291/431 (68%), Gaps = 13/431 (3%) Strand=Plus/Plus Query 159652 CTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTCTT 159711 |||||||||||| | |||||||| || || || ||||| || | || || ||| | Sbjct 365355 CTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCATAAAGTCAAAGGGATTCGT 365414 Query 159712 CACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCGAT 159771 | || ||| |||| || ||||| | |||| | ||| |||||||| || || Sbjct 365415 CGAGTTGTAGTGCTTAGGGTTGCCGAGGTTGACGAGCAGACGGTCGGCCACAAACTCAAT 365474 Query 159772 GTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGACAG 159831 ||| |||||| | ||| || || | |||| ||||| || || || | || Sbjct 365475 GTACTGGCACATCAGGCGGGCGTTCATGCCAATCAGCGAGACGGGCAGAGCGTCGGTCAA 365534 Query 159832 AAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACAC-GT-TCG---TAC 159886 ||| |||| |||||| | || || || || | || ||| ||| || ||| | Sbjct 365535 AAAGTCCTGCTCAATGGCCACAGCCTCCGTAATGAT--GCGGTTCACTGTGTCGGGGTGG 365592 Query 159887 CCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCC 159946 | |||| || |||| |||| |||||||| ||||||||| |||||| || Sbjct 365593 GCGCGCTTCTTCAG---GTGGC---TAAAGAGGAGGCAGGCAAAGTCGGTGTGCAGACCT 365646 Query 159947 TCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTG 160006 ||||| || || |||| |||||| || | ||||| ||||||| || ||| ||| Sbjct 365647 TCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGGCCGGGCATGAGGCCCCGCTTCTTG 365706 Query 160007 AGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCC 160066 ||||| || || | |||||| | ||| |||||||| ||||||||||| ||||| ||| Sbjct 365707 AGCCAGAAGATCGACGCAAACGAACCCGAGAAAAAGATACCCTCCACGGCTGCAAAAGCC 365766 Query 160067 ACGAGCCTCTC 160077 || || | ||| Sbjct 365767 ACAAGGCGCTC 365777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155070787280