Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1 122 2e-22 seq6 111 4e-19 seq4 111 4e-19 >seq1 Length=1489088 Score = 122 bits (134), Expect = 2e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||| || ||||| || || |||||| |||| ||||||||| || || Sbjct 496511 CGAAGGCGCAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTA 496570 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || |||||||||||||| ||||||||||| |||||||| ||||||||| ||| || Sbjct 496571 CGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCC 496630 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || |||||||| || ||| || || | ||||| | | || || |||| | Sbjct 496631 TCCTTGTCCTGAATTTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACTTCCAGC 496690 Query 199589 GTGATCGTCTTACCCGTGAG 199608 ||||||||||| || ||||| Sbjct 496691 GTGATCGTCTTGCCAGTGAG 496710 >seq6 Length=615380 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| ||||| |||||| |||| ||||||||| || ||| | ||||| Sbjct 241350 AGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCC 241409 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| ||||| || ||||| |||||||| || || || ||| Sbjct 241410 TCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCC 241469 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| ||||| | | || || || | ||||||||| Sbjct 241470 TGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 241529 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || | ||| Sbjct 241530 TTCCCGGTCAGGGTCTTGACGAACACTTG 241558 >seq4 Length=1186707 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || || |||||| || | ||||||||| || || | || || Sbjct 399075 AGCACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCC 399016 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| |||||||| |||||||| || || || ||| Sbjct 399015 TCGAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCC 398956 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| ||||||| | ||| || || | |||||||||| Sbjct 398955 TGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTC 398896 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || ||||| Sbjct 398895 TTGCCAGTCAGAGTCTTGACGAAGATTTG 398867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921403635871