Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq4 131 2e-25 seq6 123 3e-23 seq1 111 2e-19 >seq4 Length=1186707 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||||| || || ||||||||| || || || |||| || Sbjct 399073 CACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCCTC 399014 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||| |||||||| |||| ||||| ||||| | || | | |||||||||| Sbjct 399013 GAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTG 398954 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| | | | |||||| ||||| || || | |||||| || || Sbjct 398953 GATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTCTT 398894 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || || ||||||||||| Sbjct 398893 GCCAGTCAGAGTCTTGACGAAGATTTGCAT 398864 >seq6 Length=615380 Score = 123 bits (136), Expect = 3e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| || || | || |||||||| ||||| ||||||||| |||||||| | Sbjct 241346 ACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACC 241405 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || |||||||||||||| || |||| |||||| ||||| | || | | |||||| Sbjct 241406 ATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTT 241465 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||| | || | | ||||||| || ||||| || | ||||| Sbjct 241466 GTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGAT 241525 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || ||||| || || || || | |||||| Sbjct 241526 CGTCTTCCCGGTCAGGGTCTTGACGAACACTTGCAT 241561 >seq1 Length=1489088 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||| || || | || |||||||| ||||| ||||||||| || || || || Sbjct 496517 CGCAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGCCG 496576 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || ||||||||||||||||| |||| ||||| ||||| | || | || ||||||| Sbjct 496577 TCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTG 496636 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| || || ||||| | | | |||||| ||| || || |||| |||||| Sbjct 496637 TCCTGAATTTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACTTCCAGCGTGATC 496696 Query 46559 GTTTTGCCCGTCAG 46572 || ||||| || || Sbjct 496697 GTCTTGCCAGTGAG 496710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238308148760