Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq8 410 1e-109 seq1 114 1e-20 seq6 111 2e-19 seq4 107 2e-18 >seq8 Length=423986 Score = 410 bits (454), Expect = 1e-109 Identities = 592/827 (72%), Gaps = 25/827 (3%) Strand=Plus/Plus Query 132627 CTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGC 132686 ||| ||||| || | || |||| || |||||| | |||||| || ||||| || | Sbjct 365355 CTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCATAAAGTCAAAGGGATTCGT 365414 Query 132687 TGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743 | |||||||||||| | |||||| ||| ||||||||| | ||||||||| ||||| Sbjct 365415 CGAGTTGTAGTGCTTAGGGTTGCCGA---GGTTGACGAGCAGACGGTCGGCCACAAACTC 365471 Query 132744 GATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGT 132803 ||||| || |||| | || | || | ||| || ||||| || ||||| Sbjct 365472 AATGTACTGGCACATCAGGCGGGCGTTCATGCCAATCAGCGAGACGGGCAGAGCGTCGGT 365531 Query 132804 GAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT----TTCCCTAACGCGCGCCG 132859 | |||| ||||| ||||| || || || || | ||| ||| || | | || Sbjct 365532 CAAAAAGTCCTGCTCAATGGCCACAGCCTCCGTAATGATGCGGTTCACT-----GTGTCG 365586 Query 132860 CGCTCGGC-CGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918 | | ||| || | | || || | || | | ||| ||||||||| |||| || Sbjct 365587 GGGTGGGCGCGCTTCTTCAGGTGGCTAAAGAGGAGGCAGGCAAAGTCGGTGTGCAGACCT 365646 Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978 ||||| | |||||||| ||||| ||| | || ||||||||||||||| || || ||| Sbjct 365647 TCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGGCCGGGCATGAGGCCCCGCTTCTTG 365706 Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038 ||||| || || | || || ||||| || |||| ||||| ||||| || |||||| Sbjct 365707 AGCCAGAAGATCGACGCAAACGAACCCGAGAAAAAGATACCCTCCACGGCTGCAAAAGCC 365766 Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098 || |||||||| ||||| ||| ||| | |||||||||||| ||||| |||||| Sbjct 365767 ACAAGGCGCTCCGAGAACGAGGCACGCTTGTCCGAGATCCAGCGCAGGGCCCAGTCGGCC 365826 Query 133099 TTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCT--TCCG 133156 |||| |||||| || ||||| ||||| || || || | | | | | || |||| Sbjct 365827 TTTTGCTTGACGACGGGGATCGTCTCGATCGCATTAAAGAGAT--ACTCGCGCTGCTCCG 365884 Query 133157 AGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGG 133216 ||| | |||||||||||| ||| ||| ||| |||||||||| | ||||||||| Sbjct 365885 GCTCACGGATGTAGGTGTCGATCAGGAGCGAGTACGTTTCCGAGTGAATGTTCTCCATCA 365944 Query 133217 CGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAA-CGC 133275 || ||||||||||||||||| || |||||| || ||||||| || | || ||| ||| Sbjct 365945 TAATCTGAAAGCCGTAAAAGCAGCGGGCCTCGGCCGCCTGCACCTC-GGCGCTAAAGCGC 366003 Query 133276 TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG 133335 |||||||| || || ||||||||||| || |||||| || || ||||| ||||| | Sbjct 366004 TCGACCAGGTTCTCATTGACGATGCCATCCGAGGCGGCAAAGAACGCCAGGACGTGGCTC 366063 Query 133336 ATGAAATGGCGCTCGTTGTCGTTCAAGC---GCTCCCAGTCGCGCGTGTCCTTGGACAGG 133392 | || |||||||| |||||||||| || | ||||||||| || ||| || |||||| Sbjct 366064 ACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGTCCCAGTCGTGCAGGTCTTTCGACAGG 366123 Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 |||| ||| || ||||||| ||||| ||||| || || |||||||| Sbjct 366124 TCCATCTCTTCAGCGGTCCAGAACGAGGCCTCCGCCTTCTTGTACAT 366170 >seq1 Length=1489088 Score = 114 bits (126), Expect = 1e-20 Identities = 146/196 (74%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACA-GCGTGCAAACGCTTAA 38323 ||||| ||||| || ||||| | || |||||| | | |||| | || || | | || Sbjct 496710 CTCACTGGCAAGACGATCACGCTGGAAGTCGAGTCGTCGGACACGATTGACAATG-TCAA 496652 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 | ||||| | ||||| ||||| ||||| | ||||||||||| || || | ||| || Sbjct 496651 GGCCAAAATTCAGGACAAGGAGGGCATTCCTCCGGACCAACAGCGTCTGATCTTCGCCGG 496592 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGC 38442 ||| |||||||| |||| || || || | ||||||||||||||| ||||| ||| |||| Sbjct 496591 CAAGCAGCTGGAAGACGGCCGTACGCTGAGCGACTACAACATCCAGAAGGAGAGC-ACGC 496533 Query 38443 TGCATTTGGTGCTGCG 38458 | || | |||||||| Sbjct 496532 TTCACCTCGTGCTGCG 496517 >seq6 Length=615380 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||| | ||||| || || || || || || || |||||| | || || ||| | || Sbjct 241561 ATGCAAGTGTTCGTCAAGACCCTGACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 241502 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| || ||| | |||||| Sbjct 241501 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 241442 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || ||||| |||||||| || | ||||| || | |||||||||| Sbjct 241441 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTGAGCGACTACAAC 241382 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||| || || || | ||||| ||| || | || || Sbjct 241381 ATCCAGAAGGAGAGC-ACTCTTCACCTTGTGCTTCGTCTGCGTGGTGG 241335 >seq4 Length=1186707 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| | || || || || | Sbjct 398864 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTTGAGGTTGAATCCTCA 398923 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| || ||| | |||||| Sbjct 398924 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 398983 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || ||||| || |||| || ||||| | |||||||||| Sbjct 398984 CAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGTACCCTGAGCGACTACAAC 399043 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 || || ||||| ||| || ||||| | ||||| || Sbjct 399044 ATTCAGAAGGAGAGC-ACCCTGCACCTCGTGCTTCG 399078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172718721920