Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq8 95.1 1e-14 >seq8 Length=423986 Score = 95.1 bits (104), Expect = 1e-14 Identities = 341/529 (64%), Gaps = 7/529 (1%) Strand=Plus/Plus Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080 || ||||| || || | || || | |||||| || || ||||| || || || || || Sbjct 365683 CCGGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATCGACGCAAACGAACCCGAGAAAAAG 365742 Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTA-GCATCATTATTATG 19139 ||||| || || ||||||||||| || || | || | | ||| | ||| || | Sbjct 365743 ATACCCTCCACGGCTGCAAAAGCCACAAGGCGCTC-CGAGAACGAGGCACGCTTGTCCGA 365801 Query 19140 AATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATT 19199 ||||| ||| ||||| || ||||| | || || || || ||||| || | ||| Sbjct 365802 GATCCAGCGCAGGGCCCAGTCGGCCTTTTGCTTGACGACGGGGATCGTCTCGATCGCATT 365861 Query 19200 AAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACAT 19259 ||| |||||| |||| || | || | || | || |||| | |||| | Sbjct 365862 AAAGAGATACTCGCGCTGCTCCGGCTCACGGATGTAGGTGTCGATCAGGAGCGAGTACGT 365921 Query 19260 TTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTAT 19319 ||| || ||||| || || || |||||||| |||||||| || | || || | Sbjct 365922 TTCCGAGTGAATGTTCTCCATCATAATCTGAAAGCCGTAAAAGCAGCGGGCCTCGGCCGC 365981 Query 19320 CTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGC 19379 ||| || || | ||| | ||||||| || ||||| || || ||||| || || Sbjct 365982 CTGCACCTCGGCGCTAAAGCGCTCGACCAGGTTCTCATTGACGATGCCATCCGAGGCGGC 366041 Query 19380 AAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATG----TATTCC 19435 ||| || || | || || | | ||| || |||| || ||| ||| | || Sbjct 366042 AAAGAACGCCAGGACGTGGCTCACAAAGTGGCGCTCAT-TGTCGTTCATGCGGTGGTCCC 366100 Query 19436 AATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTT 19495 | || | | ||||| || | || | |||||| | ||||| || || ||||| || | Sbjct 366101 AGTCGTGCAGGTCTTTCGACAGGTCCATCTCTTCAGCGGTCCAGAACGAGGCCTCCGCCT 366160 Query 19496 TTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544 | || ||||| | ||| || || | || | ||||| || | ||||| Sbjct 366161 TCTTGTACATCTGCCAGATCTCGTGGTAGCGAATAGGGAAAAGGACAAA 366209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108708657320