Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 1e-12 >seq4 Length=1186707 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/189 (71%), Gaps = 8/189 (4%) Strand=Plus/Minus Query 29791 AGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCA----GGGT 29846 ||||| ||| || |||||||| || |||| ||| || || ||||| |||| | || Sbjct 568298 AGCTGCTTCTGCAAGGGTTCCACATGGTCCAAGTATACATGCGCGTCGCCCATCACGAGT 568239 Query 29847 GTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGA 29906 | | || |||| ||| | | |||||||||| || || | || ||| || | ||| Sbjct 568238 GAGAACTC-CTCTGCCG--TGCA-CCCGGTGACGGCGGCAATGAAGTGCGTCAGCAAAGA 568183 Query 29907 GTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTG 29966 |||||| || |||||||||||||| ||||| |||| || | || | |||||| | || Sbjct 568182 GTAGCTAGCAATGTTAAAGGGTACACCGAGACCCAAATCGCATGAGCGCTGGTACATTTG 568123 Query 29967 ACACGAGAG 29975 || ||||| Sbjct 568122 GCAAGAGAG 568114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617535259649