Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq8 244 2e-59 >seq8 Length=423986 Score = 244 bits (270), Expect = 2e-59 Identities = 551/823 (67%), Gaps = 14/823 (2%) Strand=Plus/Plus Query 47860 CTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGG 47919 ||| || ||||| | ||| |||| || ||| ||||||||||| ||| ||||| || | Sbjct 365355 CTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCATAAAGTCAAAGGGATTCGT 365414 Query 47920 TGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGAT 47979 | ||| || | | ||| | | | ||||| | || || || |||| || Sbjct 365415 CGAGTTGTAGTGCTTAGGGTTGCCGAGGTTGACGAGCAGACGGTCGGCCACAAACTCAAT 365474 Query 47980 GTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAG 48039 ||| | |||| ||| | ||||||||| || || || ||||||| ||| | || | Sbjct 365475 GTACTGGCACATCAGGCGGGCGTTCATGCCAATCAGCGAGACGGGCAGAGCGTCGGTCAA 365534 Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAAC---GCGGGACTCTGA 48096 ||| |||| ||| || ||| || ||| | || | || || | || | | Sbjct 365535 AAAGTCCTGCTCAATGGCCACAGCCTCCGTAATGATGCGGTTCACTGTGTCGGGGTGGGC 365594 Query 48097 GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTC 48156 | | || || |||||| | | |||| | |||||||||||| |||||| ||||| Sbjct 365595 GCGCTTCTT---CAGGTGGCT---AAAGAGGAGGCAGGCAAAGTCGGTGTGCAGACCTTC 365648 Query 48157 GTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAG 48216 ||| || |||||| |||| ||||| | || || ||||||| |||| || ||||| Sbjct 365649 GTCACGCGAAATGAGCTCGTTCGAGAACGACAGGCCGGGCATGAGGCCCCGCTTCTTGAG 365708 Query 48217 CCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGT 48276 |||||| || | ||| || || || ||||| ||||| |||||||| || || || || Sbjct 365709 CCAGAAGATCGACGCAAACGAACCCGAGAAAAAGATACCCTCCACGGCTGCAAAAGCCAC 365768 Query 48277 GAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTT 48336 || | ||| ||| || || |||||| ||||||||| || |||||||| ||||| Sbjct 365769 AAGGCGCTCCGAGAACGAGGCACGCTTGTCCGAGATCCAGCGCAGGGCCCAGTCGGCCTT 365828 Query 48337 CTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACT-CACCTGCGT 48395 | ||||| | || |||||||| || || ||||| | || || || | || || | Sbjct 365829 TTGCTTGACGACGGGGATCGTCTCGATCGCATTAAAGAGATACTCGCGCTGCTCCGGC-T 365887 Query 48396 CCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGA 48455 | | ||||| || ||| | |||| | || ||||| | ||||| || | Sbjct 365888 CACGGATGTAGGTGTCGATCAGGAGCGAGTACGTTTCCGAGTGAATGTTCTCCATCATAA 365947 Query 48456 TCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCA 48515 |||| || ||||| ||| | |||||| | ||||||| || | | || | ||| | Sbjct 365948 TCTGAAAGCCGTAAAAGCAGCGGGCCTCGGCCGCCTGCACCTCGGCGCTAAAGCGCTCGA 366007 Query 48516 GCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGA 48575 ||| ||||||||||| || ||||| || || |||||||| || ||||| || | | | Sbjct 366008 CCAGGTTCTCATTGACGATGCCATCCGAGGCGGCAAAGAACGCCAGGACGTGGCTCACAA 366067 Query 48576 AATGGCGCTCGTTGTGG---GTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCA 48632 | |||||||| |||| | || | | |||| | || | |||||| |||||||| Sbjct 366068 AGTGGCGCTCATTGTCGTTCATGCGGTGGTCCCAGTCGTGCAGGTCTTTCGACAGGTCCA 366127 Query 48633 CTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACAT 48675 ||||| | |||||||| || || || || |||||||| Sbjct 366128 TCTCTTCAGCGGTCCAGAACGAGGCCTCCGCCTTCTTGTACAT 366170 Score = 241 bits (266), Expect = 2e-58 Identities = 917/1422 (64%), Gaps = 63/1422 (4%) Strand=Plus/Minus Query 212732 GTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTC 212791 ||| || |||||||| ||||| | | ||| | ||||||||||||| || | | | Sbjct 379105 GTCCGCAGCCATGTCGATGATGACCTTTTGGCTAATCTCCCACACGGTCCTGTACAGCGC 379046 Query 212792 TTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTG 212851 |||| | || || | ||| | |||||||| | || || | |||| | | || Sbjct 379045 CTTGATGCGGTCAGGAATGCCAGCAATGTTCTGGATCGAGCCGCCGTGTGCAATAATCTT 378986 Query 212852 CAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGA---GG 212908 | ||| |||||||||||||| | ||| | | | | |||| | || Sbjct 378985 TTGCTTCATAGAGTCGTTCCAGAGGCC---GAGCTCGACGAGTTCGCGCAGGAGCCACGG 378929 Query 212909 GTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGG 212968 |||||| | |||||| || || | ||||| | | | ||||| ||| |||||||| Sbjct 378928 GTTGACCACCTGGAACTCGCCAGCCAGCACGCGACGCATGTAAATGTTGCTCGTGTAGGG 378869 Query 212969 CTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCAC 213028 ||| | || |||||| || || ||||| || |||||| ||||| || |||| Sbjct 378868 CTCAAAGCACTCGTTAAAGCCAAGGATCTGGCTCGTCGAGGCTGTCGGCATCGGTGCCAT 378809 Query 213029 CAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCA 213088 || || ||| | | ||||||| | || || | ||| | ||| ||||| Sbjct 378808 GAGCAGCGAGTTGCGAAGACCGTGCTGTGCAATCTGGGCCTTGAGCGAGGTCCAATCCCA 378749 Query 213089 TCTGCCAGACAGGTCC-TCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGC 213147 | |||||| ||| | | ||||||||||||| | ||||| | ||| | Sbjct 378748 T---------AGGTCCGTCGGTGTGCG-GTTCCACATGTCATATTGCAAAAGGCCCTGCG 378699 Query 213148 TCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACG 213207 | || ||||||| ||| | ||||||||| | ||| |||||||||||| Sbjct 378698 AGGCAGGACTGCCCTCGTAGGTCTCGTAGGGGCCGTACTCGGCCGCCAGCTCGCAGCTGC 378639 Query 213208 CCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTT--------GAGCTTCTT 213259 || ||||| || | |||||| || |||||||| | | ||| |||| || | Sbjct 378638 GCTCAAGGGCTGCATGGTAGATTGTCTCAAATATTTGCACGTTCAGGAGACGAGCCTCCT 378579 Query 213260 GGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGAC 213319 ||| | | ||| || ||| ||||| || | || ||||| ||||| || Sbjct 378578 GGC-TGTCAA-ACGGATAGCCCATGATCATA------AAAGCGTCCGCCAGGCCCTGAAC 378527 Query 213320 CCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA-CTTGGAGCACTCCTCCAAGGGGTAAA 213378 ||||| |||||||| | ||| | || || || | | || ||| |||| |||||| Sbjct 378526 ACCGATACCGATGGGGCGGTGGCGCATATTCGAGCGACGTGCGCTC-TCCACGGGGTAGT 378468 Query 213379 AGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGT 213438 |||| ||||||||| ||| ||||| | |||| || | |||| | |||| Sbjct 378467 AGTTAATGTCGATGATGCGGTTCAGGTTCTTGCACACCACCTTCGACACATCGTGCAGGC 378408 Query 213439 ACTCGTGATTGAACACGTAG----CCCCCGT-CCTGCAC-AAACTCAGGCAGGGCGATGC 213492 || | ||| || | | | || || ||| || |||| ||||| ||||| Sbjct 378407 GCTGGAAGTTGTACGTCTTGGACGCGCCAGTGCCTTCAATAAACGTCGGCAGAGCGATCG 378348 Query 213493 TGGCCAGGTTGCAAACGGCCACCTCCT---GAGAGTCTGTGTACTCCATGATCTCGGTGC 213549 |||||||||||| |||||| ||| | | ||| ||||||| ||||||||||||| Sbjct 378347 AGGCCAGGTTGCATACGGCCGTCTCTTCCGGCGAGC---TGTACTCGATGATCTCGGTGC 378291 Query 213550 ACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAAT 213609 |||||||| || || ||||||||||||| ||||| ||| |||||| || | Sbjct 378290 ACAGGTTGGAGCTCTTAATTGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCCGAGT 378231 Query 213610 CCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGA 213669 ||||||| || ||| | || || ||||| | ||||| | ||| || | ||| | Sbjct 378230 CCTTGTACAGGATGAACGGATTACCCGTCTCAATCTGGGCCTCCAAAATGGCGTACCACA 378171 Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACA-GCTCCGGGCGTAGCCTCGTACTGTTCGTAG 213728 | | |||||||| ||| | || || || || |||||| | ||||| Sbjct 378170 ACTTCTGCGCCTTGACAGAGCGCTTAGCACGCCCCTCACG----CTCGTAACGCTCGTAC 378115 Query 213729 AGCTCGTTGAATTCGTGGCCCCAGACCCTGTC---CAGTCCCGGACAGGATGCGGGACAC 213785 | | | || || | ||| || | ||| ||| || || || || || ||| Sbjct 378114 AAAGCTTCAAACTCCTCGCCATAG---CAGTCAGACAGACCGGGGCACTCGGCAGGGCAC 378058 Query 213786 ATGAGGCTCCAGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAG 213844 || || ||||||||| | | ||| || | |||| |||||||| |||| |||||| Sbjct 378057 ATCAGCGACCAGTCCCCATTCTGCTCA-ACGCGACGCATAAACAGGTCGGGGATCCACAG 377999 Query 213845 CGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAG 213904 |||| ||||| ||| | | | | || ||| || ||| |||||||| || | Sbjct 377998 CGCGAGGAACAAGTCGCGTGCGCGCACTTCTTCCTTGCCGTGGTTCTTGCGCAGGTCGAT 377939 Query 213905 AAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCT 213961 ||| ||||| | |||| |||||| ||||||| ||| |||||||||||||| | || | Sbjct 377938 AAATTCAAACACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGCCTGGGCGCTT 377879 Query 213962 CTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAG 214021 ||||||||||| ||||| | || ||||| | | || || | ||| || | Sbjct 377878 GTTGCCGCCCTGATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCATGGGCACAAT 377819 Query 214022 CCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCAT 214081 ||||| | ||||| || || || || |||||||| | || | | |||| || Sbjct 377818 ACCGTTACTCACGCCGTTTGTGCCAGCAATGTACGAGCCCGTCGCACGAATGTTGTGGAT 377759 Query 214082 GGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCA 214123 | || || ||||||||||| ||||||||||||||| || Sbjct 377758 GTTCAGGCCAATGCCACCGGCCGTCTTGGAGATCATGGCACA 377717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532648625920