Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3 114 4e-20 seq1 102 2e-16 >seq3 Length=1323904 Score = 114 bits (126), Expect = 4e-20 Identities = 260/390 (67%), Gaps = 6/390 (2%) Strand=Plus/Minus Query 302490 GTCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGT 302549 |||||| || || || ||||| | | ||| ||| | |||||| | || | || || Sbjct 1303736 GTCAATGCCATCTTCACCGTACGCAAACTCAATCACATTGTTCGTCGAGTTGCGCACAGT 1303677 Query 302550 CATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACC 302609 |||||| | || ||| || |||| ||||| ||||| |||||||| ||||| Sbjct 1303676 GCCATCATAGCAGATAGTAACATCCTCCAGGGCCTTGACCAAACGTCGCTGAATGTAACC 1303617 Query 302610 AGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAA 302669 || | |||||| ||||| || ||||| ||||| |||||||| |||| || ||||| Sbjct 1303616 CGTCTCGGCTGTTTTCACAGCCGTGTCAATCAGACCTTCACGACCAGCCATGGCGTGGAA 1303557 Query 302670 GAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTC 302729 || | ||| | | | ||||| | | | | || |||| || || ||||| || Sbjct 1303556 AAAGAACTCATGAGCTGTGAGCCCACGCAGATACGAATTCTCCACAAACCCACGGCTTTC 1303497 Query 302730 GGGCG---AATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786 ||| | ||||||| |||||| || ||||||| ||| | | || | || Sbjct 1303496 GGGAGTGAAATCGTC---CTTGGTGAAATGTGGCAAACTCCGATGGCGGAATCCAAACGG 1303440 Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAA 302846 |||||||| || || ||| ||| || || | || | |||||||||||| || | Sbjct 1303439 AATACGCTTACCTTCCACGGACTGTTGACCGACACATGCGGACATCTGCGAAATGTTGAT 1303380 Query 302847 ATCACTGCCCTTGGAGCCAGCATTTACCAT 302876 | ||||||||| ||||| ||||||| Sbjct 1303379 GAAAGAGCCCTTGGAACCAGCGATTACCAT 1303350 >seq1 Length=1489088 Score = 102 bits (112), Expect = 2e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 251488 CCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCC 251547 ||||| |||||||||||||| |||||||| ||||||||||| |||||||| || ||| Sbjct 765720 CCGTGCGAAATCATACAATCGCGCTCCATCTCACCGAAACGTAGACCACCGTCACGACTG 765779 Query 251548 CTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGC 251607 | |||||| | || || || ||||| | | ||| || | ||||| || | Sbjct 765780 CGACCCTCCACGGGTTGCCGTGTGAGGATCTGTACAGGGCCACGAGCACGGCTGTGAATC 765839 Query 251608 TTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACC 251651 || || | ||||| |||||||||||||||||| | | ||||| Sbjct 765840 TTGTCGTCCACCATGTGCTTGAGACGCTGGTAGTACGTCGGACC 765883 Score = 98.7 bits (108), Expect = 3e-15 Identities = 100/128 (78%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||| |||||||||||||| || |||||||| |||||||| ||||||||| | | || | Sbjct 766075 CGATGGTCATACGACTGGGGATGGCATGGGGGTTGATGATAATGTCGGGTGTAATGCCTT 766134 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTGTCCG 251961 | || |||||||||| || ||| | | || || | ||||| || |||||||||||| Sbjct 766135 CGGCCGTGAAGGGCAAAT-CTTCTTGGCGGTACGTGATACCAATGGTACCCTTTTGTCCG 766193 Query 251962 TGACGAGA 251969 || || || Sbjct 766194 TGTCGCGA 766201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817354850381