Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq8 159 4e-33 seq3 131 2e-24 seq1 109 7e-18 >seq8 Length=423986 Score = 159 bits (176), Expect = 4e-33 Identities = 214/293 (73%), Gaps = 11/293 (4%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||| |||||||| || ||||| |||||||||||| | |||| ||| | | Sbjct 365924 CCGAGTGAATGTTCTCCATCATAATCTGAAAGCCGTAAAAGCAGCGGGCCTCGGCCGCCT 365983 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | ||||| | || || || |||||||||| |||||||| || |||||| | Sbjct 365984 GCACCTCGGCGCTAAAGCGCTCGACCAGGTTCTCATTGACGATGCCATCCGAGGCGGCAA 366043 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCGACA--CCCAGT 869807 | || ||||||||||| | | |||||||||||| | |||| | | ||| |||||| Sbjct 366044 AGAACGCCAGGACGTGGCTCACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGTCCCAGT 366103 Query 869808 GGAC--GGTGT--CGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCC 869863 | ||| | || | ||||||| ||| || |||||||||| ||||||||| ||| Sbjct 366104 CGTGCAGGTCTTTCGAC----AGGTCCATCTCTTCAGCGGTCCAGAACGAGGCCTCCGCC 366159 Query 869864 TTTTTGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCG 869916 || |||||||||| ||| | | |||||||| |||||||| ||||||||||| Sbjct 366160 TTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATAGGGAAAAGGACAAAGCG 366212 Score = 158 bits (174), Expect = 1e-32 Identities = 195/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || ||| || ||||||||||| || | ||| | || || ||||||||||| | ||||| Sbjct 377872 GCCCTGATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCATGGGCACAATACCGTT 377813 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 | ||||||| ||||| || | ||| | ||| | || || | ||||| | | Sbjct 377812 ACTCACGCCGTTTGTGCCAGCAATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAG 377753 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 ||| ||||| ||||||| ||||||||| | || ||| ||||||||||| || ||||| Sbjct 377752 GCCAATGCCACCGGCCGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCATAAATGCC 377693 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 ||| ||||| ||| ||||||| || || ||||||||||| | || ||||| | ||| Sbjct 377692 CTCAATCGAATCGTCCTTCATACTGACAAGGAAGCACGACGACATCTGAGGGTGGGGCGT 377633 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGC 1630328 || || ||||| || || |||| ||| Sbjct 377632 ACCCGCATTGAACAGGGTTGGCGACGC 377606 Score = 154 bits (170), Expect = 2e-31 Identities = 174/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 |||||||| || ||| | ||||| |||||||||||||| | |||||||| ||||| || Sbjct 365329 GCCTTGGCATAGTCGGCGACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATG 365388 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | || || || | || ||||||||||| | ||||| || Sbjct 365389 TTCTCCATAAAGTCAAAGGGATTCGTCGAGTTGTAGTGCTTAGGGTTGCCGAGGTTGACG 365448 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| |||||||| |||||||| |||||||||||||| |||| |||||||||||| || Sbjct 365449 AGCAGACGGTCGGCCACAAACTCAATGTACTGGCACATCAGGCGGGCGTTCATGCCAATC 365508 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923 |||| || ||||| | ||| ||| ||| || | ||| || | || ||||| Sbjct 365509 AGCGAGACGGGCAGAGCGTCGGTCAAAAAGTCCTGCTCAATGGCCACAGCCTC 365561 Score = 134 bits (148), Expect = 2e-25 Identities = 293/444 (66%), Gaps = 10/444 (2%) Strand=Plus/Minus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGG 1628221 ||| || |||||||||||||||||||| | | | || |||||||||| ||||||| Sbjct 378308 ACTCGATGATCTCGGTGCACAGGTTGGAGCTCTTAATTGTGCCCAGGTTCTTCTGGTTGC 378249 Query 1628222 TGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCG 1628281 | | ||||| | | |||||||| || ||| | || || ||||| ||||| ||| Sbjct 378248 TCTTGCGGTTGGCCGAGTCCTTGTACAGGATGAACGGATTACCCGTCTCAATCTGGGCCT 378189 Query 1628282 CGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGC---GCGCGGCCCTNNN 1628338 | | ||||| |||| | || |||| | ||||| ||| || || |||| Sbjct 378188 CCAAAATGGCGTACCACAACTTCTGCGC---CTTGACAGAGCGCTTAGCACGCCCCTCAC 378132 Query 1628339 NNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCG 1628398 ||||| || |||| ||||| || ||| ||||| Sbjct 378131 GCTCGTAACGCTCGTACAAAGCTTCAAACTCCTCGCCATAGCAGTCAGACAGACCGGGGC 378072 Query 1628399 CCTCGGACGGACAAAAGAGCGACCAGTCGCCA--CCGGTCACCGCGCGGCGCATAAAGAG 1628456 ||||| || || | ||||||||||| ||| | | ||| |||| |||||||| || Sbjct 378071 ACTCGGCAGGGCACATCAGCGACCAGTCCCCATTCTGCTCAACGCGA--CGCATAAACAG 378014 Query 1628457 GTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTT 1628516 ||| ||||||| ||| || | |||||| || || || |||||||||||||| Sbjct 378013 GTCGGGGATCCACAGCGCGAGGAACAAGTCGCGTGCGCGCACTTCTTCCTTGCCGTGGTT 377954 Query 1628517 CTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAA 1628576 ||| ||||||| | || | | || | |||||| ||||||||||| |||||| Sbjct 377953 CTTGCGCAGGTCGATAAATTCAAACACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAA 377894 Query 1628577 GGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||||| ||||||| |||||| Sbjct 377893 GGCGCCTGGGCGCTTGTTGCCGCC 377870 Score = 127 bits (140), Expect = 2e-23 Identities = 185/254 (73%), Gaps = 13/254 (5%) Strand=Plus/Plus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGAT-GGCGCAGAAACTGCCCGAGAA 869274 ||||||||||||||||| |||||||||||||| ||||| | |||| || |||||||| Sbjct 365680 AGGCCGGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATCGACGCA-AACGAACCCGAGAA 365738 Query 869275 AAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTC 869334 |||||| ||||| ||||| ||||| | | || ||||| | || |||||| | Sbjct 365739 AAAGATACCCTCCACGGCTGCAAAAGCCACAAGGCGCTCCGAGAA-----CGAGGCAC-G 365792 Query 869335 CTTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGAC-GGCACCGTGT 869390 ||||| |||||| || |||||||||||||||| | | | |||| || | ||| | Sbjct 365793 CTTGTCCGAGATCCAGCGCAGGGCCCAGTCGGCCTTTTGCTTGA-CGACGGGGATCGTCT 365851 Query 869391 CGATGGCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGA 869450 |||| || |||||| | || | |||| || || |||||||||||||||| Sbjct 365852 CGATCGCATTAAAGAGATACTCGCGCTGCTCCGGCTCACGGATGTAGGTGTCGATCAGGA 365911 Query 869451 GCGAATAGGTCTCC 869464 |||| || || ||| Sbjct 365912 GCGAGTACGTTTCC 365925 Score = 116 bits (128), Expect = 5e-20 Identities = 341/516 (66%), Gaps = 42/516 (8%) Strand=Plus/Minus Query 1626985 TCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCGGTC 1627044 || ||||| |||||||| || | ||||| || | |||||||| |||||| ||||||| Sbjct 379272 TCCACGGTGAACTGGATCGCCTGTGCGGCAGGGCGCGTGCGCAGGTAGTACGAGCCGGTC 379213 Query 1627045 TTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCGTCG 1627104 |||||||| ||| |||| |||||||||||| | ||| | | || | Sbjct 379212 TTGAGGCCCTTCTTCCAGCCGTAAAAGTGCATCGACGTAA---GCT--GTCCAAAGGTTG 379158 Query 1627105 GCGCA-----GTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCG 1627159 | ||| || | |||||| ||||||||| ||| | | |||| || || | Sbjct 379157 GGGCACTTAGGTGAATGTTGAGACTCTGGCTCTGACACACAAAAGCGCCGCGGTCCGCAG 379098 Query 1627160 CCATGTCGATGGTGACCCGGTTGGGC--ACCTCCCACACGGTCTTGAAGATGGCCTTGAG 1627217 ||||||||||| ||||| || ||| | ||||||||||||| || | | ||||||| Sbjct 379097 CCATGTCGATGATGACCT--TTTGGCTAATCTCCCACACGGTCCTGTACAGCGCCTTGAT 379040 Query 1627218 GTCGGGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCG---ACGAG 1627274 | ||| | | | | | ||| | ||| | ||||||| ||| | | | Sbjct 379039 G-CGGTCAGGAATGC-----CAGCAATGTTCTGGATCGAGCCG----CCGTGTGCAATAA 378990 Query 1627275 CCTGTCGCG----AAAGTCGGGCGTCCACAGGCCGCGCGCCATCAG---GCGCTTGA-CC 1627326 || | || | ||||| |||| |||||| || | | || |||| || || Sbjct 378989 TCTTTTGCTTCATAGAGTCGT---TCCAGAGGCCGAGCTCGACGAGTTCGCGCAGGAGCC 378933 Query 1627327 AGGTGGCGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTG 1627386 | | |||||||||| || ||||| | |||||||| ||| |||| |||||| | Sbjct 378932 ACG----GGTTGACCACCTGGAACTCGCCAGCCAGCACGCGACGCATGTAAATGTTGCTC 378877 Query 1627387 GTGATGACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATG 1627446 ||| | ||| | |||| | ||| |||||||| ||||| ||| || ||||| Sbjct 378876 GTGTAGGGCTCAAAGCACTCGTTAAAGCCAAGGATCTGGCTCGTCGAGGCTGTCGGCATC 378817 Query 1627447 AGCGCCACGAGGAGCGAGTTGCGCAGGCCGTGCTGT 1627482 | |||| ||| ||||||||||| || ||||||||| Sbjct 378816 GGTGCCATGAGCAGCGAGTTGCGAAGACCGTGCTGT 378781 >seq3 Length=1323904 Score = 131 bits (144), Expect = 2e-24 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 1254365 GATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTG 1254424 |||||||||||| || ||||||||||| |||| ||| ||| | |||||| || Sbjct 485479 GATCAGGCGCACAGCCGTCTGGATCTCACGCGACGAGATGGTGCTCTTCTTGTTGTAGCT 485538 Query 1254425 CGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1254484 ||||| |||||||||| ||||||| |||| ||||| | || |||||||| | Sbjct 485539 GGCCAGCTTCGAGGCCTCGGTGGCGATGCGCTCGAAAATGTCCTGCACGAACGAGTTGAG 485598 Query 1254485 GACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 | | ||| | |||||| ||||| ||| ||||||||||||||||||||| || ||| Sbjct 485599 AATGGCCATAGCCTTGTTCGAGATACCCGTGTCGGGGTGCACCTGCTTGAGGACACGGTA 485658 Query 1254545 GATGAACGACGAGTA 1254559 |||| ||| |||||| Sbjct 485659 GATGTACGTCGAGTA 485673 >seq1 Length=1489088 Score = 109 bits (120), Expect = 7e-18 Identities = 132/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 1574070 CGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCC 1574129 || |||||| | || || ||||||||||| ||| || | ||| | | ||||||||||| Sbjct 983922 CGGCACAAGATTATTATTCTCGACGAGGCGGACAGCATGACGCCCGGTGCCCAGCAGGCG 983981 Query 1574130 CTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACG 1574189 || || ||||||||| | || | |||||||||||| | | || |||||| Sbjct 983982 CTACGCCGCACCATGGAGATTTACGCGCCCACGACGCGCTTCTGCTTTGCATGCAACCAA 984041 Query 1574190 TCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTTTGTGCGCCTG 1574249 ||| | | |||||||| | |||| ||||||||||| ||| ||||||||| |||| || Sbjct 984042 TCGAACAAGATCATCGAGCCGATCCAGAGTCGCTGCGCGATTTTGCGCTTTGGGCGCGTG 984101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138133159121