Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq8 159 5e-33 seq3 118 2e-20 seq1 98.7 2e-14 >seq8 Length=423986 Score = 159 bits (176), Expect = 5e-33 Identities = 215/295 (73%), Gaps = 11/295 (4%) Strand=Plus/Plus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTG-CCCGAGAA 794435 ||||||||||||||||| |||||||||||||| ||||| | || |||| |||||||| Sbjct 365680 AGGCCGGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATCG-ACGCAAACGAACCCGAGAA 365738 Query 794436 AAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTC 794495 |||||| ||||| ||||| ||||| | || || ||||| | || | |||| | | Sbjct 365739 AAAGATACCCTCCACGGCTGCAAAAGCCACAAGGCGCTCCGAGAACG-----AGGCACGC 365793 Query 794496 TTTGTT---GATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTC 794552 || || |||||| || ||||| || ||||||| | | || ||| | ||| || Sbjct 365794 TT-GTCCGAGATCCAGCGCAGGGCCCAGTCGGCCTTTTGCTTGACGACGGGGATCGTCTC 365852 Query 794553 GATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAG 794612 ||| || |||||| | || || |||| || || |||||||||||| ||||| Sbjct 365853 GATCGCATTAAAGAGATACTCGCGCTGCTCCGGCTCACGGATGTAGGTGTCGATCAGGAG 365912 Query 794613 CGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 |||||| || || ||||| ||||| || || ||||| ||||| ||||||||| Sbjct 365913 CGAGTACGTTTCCGAGTGAATGTTCTCCATCATAATCTGAAAGCCGTAAAAGCAG 365967 Score = 158 bits (174), Expect = 2e-32 Identities = 210/292 (72%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || ||| || || |||||||| || | ||| | || || ||||||||||||| ||||| Sbjct 377872 GCCCTGATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCATGGGCACAATACCGTT 377813 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 | ||||||| ||||| || | ||| | ||||| || || | ||||| | | Sbjct 377812 ACTCACGCCGTTTGTGCCAGCAATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAG 377753 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 ||| ||||| ||||||| ||||||||| | || ||| | || ||||| || || ||||| Sbjct 377752 GCCAATGCCACCGGCCGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCATAAATGCC 377693 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 ||| ||||| ||| ||||||| | || ||||||||||| | || ||| | | ||| Sbjct 377692 CTCAATCGAATCGTCCTTCATACTGACAAGGAAGCACGACGACATCTGAGGGTGGGGCGT 377633 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATG 2073828 || |||||||| || || |||| ||| |||| | | || | ||||||| Sbjct 377632 ACCCGCATTGAACAGGGTTGGCGACGCGTGCGTGAAAGCCTTCTCGGACATG 377581 Score = 154 bits (170), Expect = 2e-31 Identities = 294/439 (67%), Gaps = 0/439 (0%) Strand=Plus/Minus Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGC 2071633 ||| || || ||||||||||||||||| | | | ||||||||||||| |||||||| Sbjct 378308 ACTCGATGATCTCGGTGCACAGGTTGGAGCTCTTAATTGTGCCCAGGTTCTTCTGGTTGC 378249 Query 2071634 TGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCG 2071693 | | ||||| | | |||||||| ||| ||| | || ||||||||| ||||| ||| Sbjct 378248 TCTTGCGGTTGGCCGAGTCCTTGTACAGGATGAACGGATTACCCGTCTCAATCTGGGCCT 378189 Query 2071694 TGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNN 2071753 | ||||| |||| | | |||| || ||| | | || || |||| Sbjct 378188 CCAAAATGGCGTACCACAACTTCTGCGCCTTGACAGAGCGCTTAGCACGCCCCTCACGCT 378129 Query 2071754 NNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCT 2071813 | | || ||||| | |||| | ||| || ||| ||||| || Sbjct 378128 CGTAACGCTCGTACAAAGCTTCAAACTCCTCGCCATAGCAGTCAGACAGACCGGGGCACT 378069 Query 2071814 CGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGC 2071873 ||| ||||| | ||||||||||| || | | ||||| ||||||||||||||| Sbjct 378068 CGGCAGGGCACATCAGCGACCAGTCCCCATTCTGCTCAACGCGACGCATAAACAGGTCGG 378009 Query 2071874 ACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTT 2071933 ||||||| || || | ||||| || || || ||||||||||||||||| Sbjct 378008 GGATCCACAGCGCGAGGAACAAGTCGCGTGCGCGCACTTCTTCCTTGCCGTGGTTCTTGC 377949 Query 2071934 TCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGC 2071993 |||||||| | || | | || | |||||| ||||||||||| ||||||||||| Sbjct 377948 GCAGGTCGATAAATTCAAACACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGC 377889 Query 2071994 CCTTGCGCTTGCCGCCGCC 2072012 | ||||||| |||||| Sbjct 377888 CTGGGCGCTTGTTGCCGCC 377870 Score = 145 bits (160), Expect = 1e-28 Identities = 184/251 (73%), Gaps = 4/251 (2%) Strand=Plus/Plus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 ||| || ||||||||||| ||| | ||||| |||||||||||||| | |||||||| || Sbjct 365322 GACACCGGCCTTGGCATAGTCGGCGACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGCAG 365381 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011 ||| || |||||| | || || || | || ||||||||| | ||||| Sbjct 365382 CGAAATGTTCTCCATAAAGTCAAAGGGATTCGTCGAGTTGTAGTGCTTAGGGTTGCCGAG 365441 Query 794012 C--GACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069 |||| ||||| |||||||| || || ||||||||||||||||| ||| ||||||| Sbjct 365442 GTTGACG--AGCAGACGGTCGGCCACAAACTCAATGTACTGGCACATCAGGCGGGCGTTC 365499 Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129 ||||| || |||| |||||||| | ||| | | ||| || | ||| || | || ||| Sbjct 365500 ATGCCAATCAGCGAGACGGGCAGAGCGTCGGTCAAAAAGTCCTGCTCAATGGCCACAGCC 365559 Query 794130 TCGATGATGAT 794140 || | ||||| Sbjct 365560 TCCGTAATGAT 365570 Score = 143 bits (158), Expect = 4e-28 Identities = 346/511 (68%), Gaps = 32/511 (6%) Strand=Plus/Minus Query 2069254 TCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGTC 2069313 || ||||| |||||||| || | |||||||| || |||||||| |||||| ||||||| Sbjct 379272 TCCACGGTGAACTGGATCGCCTGTGCGGCAGGGCGCGTGCGCAGGTAGTACGAGCCGGTC 379213 Query 2069314 TTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCATTCGGGACG 2069373 |||||||| ||| |||| |||||||||||| | || || | | Sbjct 379212 TTGAGGCCCTTCTTCCAGCCGTAAAAGTGCATCGACGTAAG---CTGTCCAAAGGTTGGG 379156 Query 2069374 GCACA---GTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGCC 2069430 |||| || | |||||| ||||||||| ||| | | ||||||| || ||| Sbjct 379155 GCACTTAGGTGAATGTTGAGACTCTGGCTCTGACACACAAAAGCGCCGCGGTCCGCAGCC 379096 Query 2069431 ATGTCGATGGTCACGCGGTTGGACAC-CTCCCACACGGTCTTGAACAGGGCCTTGAGATG 2069489 ||||||||| | || | |||| | ||||||||||||| || |||| ||||||| || Sbjct 379095 ATGTCGATGATGAC-CTTTTGGCTAATCTCCCACACGGTCCTGTACAGCGCCTTGA--TG 379039 Query 2069490 CGG-CGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCC-CTGCGCTGCGATGAGGCGG 2069547 ||| | | | | || ||| | ||| | |||||| | | | ||| || | | Sbjct 379038 CGGTCAGGAATGC-----CAGCAATGTTCTGGATCGAGCCGCCGTG-TGCAATAAT-CTT 378986 Query 2069548 TCGCG----AAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGC- 2069602 | || | ||||| |||| |||||| || | | | | ||| |||| | | Sbjct 378985 TTGCTTCATAGAGTCGT---TCCAGAGGCCGAGCTCGACGA---GTTCGCGCAGGAGCCA 378932 Query 2069603 --GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGAT 2069660 |||||||||| || ||||| | |||||||| ||| |||| |||||||||||| Sbjct 378931 CGGGTTGACCACCTGGAACTCGCCAGCCAGCACGCGACGCATGTAAATGTTGCTCGTGTA 378872 Query 2069661 GACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGC 2069720 | ||| | |||| | ||| |||||||| ||||| ||| || ||||| | || Sbjct 378871 GGGCTCAAAGCACTCGTTAAAGCCAAGGATCTGGCTCGTCGAGGCTGTCGGCATCGGTGC 378812 Query 2069721 CACGAGCAGCGAGTTGCGCAGGCCGTACTGT 2069751 || ||||||||||||||| || |||| |||| Sbjct 378811 CATGAGCAGCGAGTTGCGAAGACCGTGCTGT 378781 Score = 132 bits (146), Expect = 8e-25 Identities = 184/253 (73%), Gaps = 5/253 (2%) Strand=Plus/Plus Query 796140 AAAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGC 796199 ||| || | |||||||| | || ||||| | ||||| || ||||||||||| Sbjct 365961 AAAGCAGCGGGCCTCGGCCGCCTGCACCTCGGCGCTAAAGCGCTCGACCAGGTTCTCATT 366020 Query 796200 CACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTC 796259 |||||||| || |||||| || || || |||||||| | | |||||| ||||| | Sbjct 366021 GACGATGCCATCCGAGGCGGCAAAGAACGCCAGGACGTGGCTCACAAAGTGGCGCTCATT 366080 Query 796260 GTCGCTGA-GCG--AGACCCAGTGGACCGTGTC-GGCGCCGAGGTCGACCTCCTCGGCGG 796315 |||| | | ||| | |||||| | | ||| || | ||||| | ||| || |||| Sbjct 366081 GTCGTTCATGCGGTGGTCCCAGTCGTGCAGGTCTTTCGAC-AGGTCCATCTCTTCAGCGG 366139 Query 796316 TCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGA 796375 |||| || |||||||| ||||| |||||||||| ||| ||| |||||||| || |||| Sbjct 366140 TCCAGAACGAGGCCTCCGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATAGGGA 366199 Query 796376 ACAGAACAAAGCG 796388 | || |||||||| Sbjct 366200 AAAGGACAAAGCG 366212 Score = 109 bits (120), Expect = 9e-18 Identities = 143/193 (74%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 2070052 GCCGCATGGTAGATCGTCTCAAAGATGGTGCG-GTTGAGGCGACGCGCGCCGGCGCTCTC 2070110 || ||||||||||| |||||||| || ||| ||| ||| |||| || | ||| || Sbjct 378630 GCTGCATGGTAGATTGTCTCAAATATT-TGCACGTTCAGGAGACGAGCCTCCTGGCTGTC 378572 Query 2070111 CCACGGCAGGTCCATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGG 2070170 |||| | |||| || ||| ||||| ||||||||||| || |||| || || || Sbjct 378571 AAACGGATAGCCCATGATCATAAAAGCGTCCGCCAGGCCCTGAACACCGATACCGATGGG 378512 Query 2070171 CCGGTGGCGCAGGTTCGAGTGCCGGGC-CTCGGGCACCGGGTAGTGGTTGATGTCGATCA 2070229 |||||||||| |||||| | || || ||| ||| ||||||| ||| |||||||| | Sbjct 378511 GCGGTGGCGCATATTCGAGCGACGTGCGCTC-TCCACGGGGTAGTAGTTAATGTCGATGA 378453 Query 2070230 CGCGGTTGAGGTT 2070242 |||||| ||||| Sbjct 378452 TGCGGTTCAGGTT 378440 >seq3 Length=1323904 Score = 118 bits (130), Expect = 2e-20 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 1485505 GCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTG 1485564 |||||| | | ||| || || | | |||||||||||| || ||||||||||| || | Sbjct 485453 GCGTGCTTCGACAGCTCACCAGGGAGGATCAGGCGCACAGCCGTCTGGATCTCACGCGAC 485512 Query 1485565 CCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCG 1485624 ||| ||| | |||||| || ||||| |||||||||| ||||||| ||| Sbjct 485513 GAGATGGTGCTCTTCTTGTTGTAGCTGGCCAGCTTCGAGGCCTCGGTGGCGATGCGCTCG 485572 Query 1485625 ATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCG 1485684 | ||||| | || |||||||| | || | ||| | ||||| ||||| ||| |||| Sbjct 485573 AAAATGTCCTGCACGAACGAGTTGAGAATGGCCATAGCCTTGTTCGAGATACCCGTGTCG 485632 Query 1485685 GGGTGCACCTGCTTGAGCAC 1485704 ||||||||||||||||| || Sbjct 485633 GGGTGCACCTGCTTGAGGAC 485652 >seq1 Length=1489088 Score = 98.7 bits (108), Expect = 2e-14 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 2019183 AAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGC 2019242 ||| | |||| || || ||| ||| |||||| | || || ||||| ||||| ||| || Sbjct 983900 AAAGGTATCG--CTTCCACCCAACCGGCACAAGATTATTATTCTCGACGAGGCGGACAGC 983957 Query 2019243 CTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACG 2019302 | ||| | | ||||||||||| || || |||||||| | ||| | ||||||| Sbjct 983958 ATGACGCCCGGTGCCCAGCAGGCGCTACGCCGCACCATGGAGATTTACGCGCCCACGACG 984017 Query 2019303 CGGTT-TGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTG 2019361 || || ||| | || |||||| ||| | | ||||||| | ||||||| || || Sbjct 984018 CGCTTCTGC-TTTGCATGCAACCAATCGAACAAGATCATCGAGCCGATCCAGAGTCGCTG 984076 Query 2019362 CGCCATCTTGCGCTTTGCGCGCCTCACCGACG 2019393 ||| || |||||||||| |||| | |||||| Sbjct 984077 CGCGATTTTGCGCTTTGGGCGCGTGTCCGACG 984108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916245017130707