Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 3e-13 seq1 89.7 1e-12 >seq4 Length=1186707 Score = 91.5 bits (100), Expect = 3e-13 Identities = 117/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 ||||| || || || || || || ||||| || | ||||| || || || || || ||| Sbjct 399021 CCGTCCTCGAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCCGGGGGGATACCCTCC 398962 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGG-TTCTACTTCCAAAGT 82771 || || || ||||| || || ||||| || ||||| || | ||| ||| || || | || Sbjct 398961 TTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTC-TGAGGATTCAACCTCAAGCGT 398903 Query 82772 TATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||||| |||| ||||| || || || ||||| Sbjct 398902 GATCGTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 398864 >seq1 Length=1489088 Score = 89.7 bits (98), Expect = 1e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 |||||||| || || || || || ||||| || | ||||| || ||||| || || ||| Sbjct 496574 CCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCC 496633 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 || || ||||| || || || ||||| |||||||| || | || ||||||| || Sbjct 496634 TTGTCCTGAATTTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACTTCCAGCGTG 496693 Query 82773 ATCGTCTTGCCTGT 82786 ||||||||||| || Sbjct 496694 ATCGTCTTGCCAGT 496707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981827036464407