Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq8 428 4e-115 seq6 122 8e-23 seq4 118 1e-21 seq1 89.7 5e-13 >seq8 Length=423986 Score = 428 bits (474), Expect = 4e-115 Identities = 1233/1851 (67%), Gaps = 83/1851 (4%) Strand=Plus/Minus Query 147951 GTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGAC 148010 |||||||| |||||| ||| |||||||||||| | ||| |||| ||||| |||| Sbjct 379236 GTGCGCAGGTAGTACGAGCCGGTCTTGAGGCCCTTCTTCCAGCCGTAAAAGTGCATCGAC 379177 Query 148011 GACATGAGCGTGTACGTCGGGTGCGGCACAAACA-GA---TTAAACGACTGGCTCTGGTC 148066 | | ||| ||| | || || ||||| | || || | ||||||||| Sbjct 379176 G---TAAGC-TGTCCAAAGGTTGGGGCACTTAGGTGAATGTTGAGACTCTGGCTCTGACA 379121 Query 148067 AATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCATCTCCCAGGC 148126 | || ||||| ||||| || ||||| || |||| |||| | |||||||| | Sbjct 379120 CACAAAAGCGCCGCGGTCCGCAGCCATGTCGATGATGACCTTTTGGCTAATCTCCCACAC 379061 Query 148127 CGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGCG 148186 ||| |||||||| |||||| | || |||||||| | ||| ||| | |||||||| Sbjct 379060 GGTCCTGTACAGCGCCTTGATGCGGTCAGGAATGCCAGCAATGTTCTGGATCGAGCCGCC 379001 Query 148187 GTGCGCAAAAATCTGATTGCG-CATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCAT 148245 ||| |||| ||||| |||| ||| ||| | | ||| |||||||| || || Sbjct 379000 GTGTGCAATAATCTT-TTGCTTCATAGAGTCGTTCCAGAGGCCGAGCTCGACGAGTTCGC 378942 Query 148246 CGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGT 148305 | || || | || |||||||| |||||||| || |||||||| |||| || | || Sbjct 378941 GCAGGAGCCACGGGTTGACCACCTGGAACTCGCCAGCCAGCACGCGACGCATGTAAATGT 378882 Query 148306 TGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGG 148365 ||||||| | || ||||| ||||||| ||| | ||||| |||| || || | Sbjct 378881 TGCTCGTGTAGGGCTCAAAGCACTCGTTAAAGCCAAGGATCTGGCTCGTCGAGGCTGTCG 378822 Query 148366 GCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAG 148425 |||| || | |||||||||||||| | |||| | | | || | | ||| || | Sbjct 378821 GCATCGGTGCCATGAGCAGCGAGTTGCGAAGACCGTGCTGTGCAATCTGGGCCTTGAGCG 378762 Query 148426 CCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGC 148485 | ||| ||||| || || |||||| |||||||||||| || |||| || ||| | Sbjct 378761 AGGTCCAATCCCATAGGTCCGTCGGTGTGCGGTTCCACATGTCATATTGCAAAAGGCC-C 378703 Query 148486 GGCTAG-CGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAG 148544 || || | || ||||||||||| | ||| || |||| | | |||||||| |||||| Sbjct 378702 TGCGAGGCAGGACTGCCCTCGTAGGTCTCGTAGGGGCCGTACTCGGCCGCCAGCTCGCAG 378643 Query 148545 CTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCC 148604 || ||| || || | | ||| || ||||| |||||| ||| || || ||| Sbjct 378642 CTGCGCTCAAGGGCTGCATGGTAGATTGTCTCAAATATTTGCACGTTCAGGAGACGAGCC 378583 Query 148605 GACTCGCTTTCGTACGGCATA-CGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCC 148663 || ||| || |||| ||| | || || ||| ||||| || |||||||| || || Sbjct 378582 TCCTGGCTGTCAAACGG-ATAGCCCATGATCATAAAAGCGTCCGCCAGGCCCTGAACACC 378524 Query 148664 CACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGATAGTGGTT 148723 | || ||||| ||||| || || ||| | || |||||||| | || |||| ||| Sbjct 378523 GATACCGATGGGGCGGTGGCGCATATTCGAGCGACGTGCGCTCTCCACGGGGTAGTAGTT 378464 Query 148724 GCGGTCGATGAT-CTTGTCAAGATTGCGCACCACCACCTTTG-TAATTC-----TGCGCA 148776 ||||||||| | ||| | | ||| ||||||||| | | || |||| Sbjct 378463 AATGTCGATGATGCGGTTCAGGTTCTTGCA-CACCACCTTCGACACATCGTGCAGGCGCT 378405 Query 148777 GCAA-TTCAAAATC--GTACTTGTCA---TCTACGAT--GCATCGGTTCACGGCGATAGA 148828 | || || | || | || | || || | || | |||| || ||||| || Sbjct 378404 GGAAGTTGTACGTCTTGGACGCGCCAGTGCCTTCAATAAACGTCGG--CAGAGCGATCGA 378347 Query 148829 GGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAG 148888 ||| || ||||| ||||||||||| ||||| | ||||||||| | |||||||| |||||| Sbjct 378346 GGCCAGGTTGCATACGGCCGTCTCTTCCGGCGAGCTGTACTCGATGATCTCGGTGCACAG 378287 Query 148889 ATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTT 148948 ||| || || || ||||| |||||| || |||||||||| |||| || |||||| Sbjct 378286 GTTGGAGCTCTTAATTGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCCGAGTCCTT 378227 Query 148949 GTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGCAG 149005 |||||| ||| |||| || || || | ||| | |||| || | ||| || Sbjct 378226 GTACAGGATGAACGGATTACCCGTCTCAATCTGGGCCTCCAAAATGGCGTACC---ACAA 378170 Query 149006 GTCCTGCGCGCGCACTTG---CTGCTCGTAG--CGACCCTCCTGCTCGTA--TAAAGTAT 149058 | |||||| |||| || | ||| || ||||| ||||||| ||| Sbjct 378169 CTTCTGCGC-----CTTGACAGAGCGCTTAGCACGCCCCTCACGCTCGTAACGCTCGTAC 378115 Query 149059 ACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACA 149118 | ||| || ||| ||||||| ||||| || ||||||||||||| | ||||||| Sbjct 378114 AAAGC--TTCAAACTCCTCGCCATAGCAGTCAGACAGACCGGGGCACTCGGCAGGGCACA 378057 Query 149119 TGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCG 149178 | |||||||| | || | | | ||||| ||||||||| ||||| | ||| |||| Sbjct 378056 TCAGCGACCAGTCCCCATTCTGCTCAACGCGACGCATAAACAGGTCGGGGATCCACAGCG 377997 Query 149179 CGTACATGAGGTCGCGCGCCTTGCA-GTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGC 149237 || | | |||||| | | ||| ||||| ||| ||| |||||||| || Sbjct 377996 CGAGGAACAAGTCGCGTG-CGCGCACTTCTTCCTTGCCGTGGTTCTTGCGCAGGTCGATA 377938 Query 149238 ACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC--- 149294 | || | |||| |||||| ||||| | ||| | || | ||||| |||| Sbjct 377937 AATTCAAACACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGCCTGGGCGCTTG 377878 Query 149295 TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATG 149354 ||||||||||| || |||| |||| | | ||||| |||| |||| ||| || |||| Sbjct 377877 TTGCCGCCCTGATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCATGGGCACAATA 377818 Query 149355 CC---ACTGGCAGTGCCGTTAGT-AGAGCTAATG--CGACTGCCGCGCGCTCGCACTTTG 149408 || ||| || |||||| || ||| |||| ||| ||| ||| || | ||| Sbjct 377817 CCGTTACT--CA-CGCCGTTTGTGCCAGC-AATGTACGA--GCCCGTCGCACGAATGTTG 377764 Query 149409 TGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCG 149466 || | ||| | ||| ||||| || ||||| ||| ||||| || || ||| ||||| Sbjct 377763 TGGATGTTCAGGCCAATGCCACCGGCCGT-CTTGGAGATCATGGCACACGTC-TTGAGCG 377706 Query 149467 TCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTT 149526 | || |||||||| || ||| |||||| | | || |||||||| |||| | Sbjct 377705 TGTCATAAATGCCCTCAATCGAATCGTCCTTCATACTGACAAGGAAGCACGACGACATCT 377646 Query 149527 GCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGC 149586 | || |||| || || ||||| ||| || ||||| || ||| |||| | Sbjct 377645 GAGGGTGGGGCGTACCCGCATTGAACAGGGTTGGCGACGCGTGCGTGAAAGCCTTCTCGG 377586 Query 149587 TCATCATCTCGTACGACTCGA--GCACGCGGTCCATGTCATCGCCATGGATGCCTATGGC 149644 ||| | ||||| ||| | |||| | | || || ||||| ||||| || | || Sbjct 377585 ACATGTAGTTGTACGTCTCAATGGCACTC--TTGATATCCTCGCCGTGGATACCAACAGC 377528 Query 149645 GACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTT---GTTTCCAATTTTGAGCAA 149701 || ||||| ||||| ||||| || ||||| || || || ||| || |||| Sbjct 377527 CACACGCATGAGCATGTGCTGAGGGCGCTCGGCAACCTTACCGTT---GATCCGCAGCAG 377471 Query 149702 GTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCG 149752 ||| | || || |||||| | || || | ||||||| ||||||||| Sbjct 377470 GTAAGAGCGCTCAAGCGTCTTGAATCCGAAAAAGTTGTAGTGAAAGTCGCG 377420 Score = 242 bits (268), Expect = 4e-59 Identities = 510/757 (67%), Gaps = 19/757 (3%) Strand=Plus/Plus Query 120355 TACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATA 120414 || ||| ||||||| ||| |||||||| | ||||||| || ||||||||| | |||| Sbjct 365338 TAGTCGGCGACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCATA 365397 Query 120415 AACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGG 120474 || || || || || ||| ||| ||| || || | ||| | | |||||||| ||| Sbjct 365398 AAGTCAAAGGGATTCGTCGAGTTGTAGTGCTTAGGGTTGCCGAGGTTGACGAGCAGACGG 365457 Query 120475 TCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACC 120534 || || |||||||||||||||| |||||| | ||||||||||| | || || || Sbjct 365458 TCGGCCACAAACTCAATGTACTGGCACATCAGGCGGGCGTTCATGCCAATCAGCGAGACG 365517 Query 120535 GGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGAGC 120594 |||| || || ||||| |||| ||||||| |||| |||||| | | ||| | | Sbjct 365518 GGCAGAGCGTCGGTCAAAAAGTCCTGCTCAATGGCCACAGCCTCCGTAATGATGCGGTTC 365577 Query 120595 ATAGTGT------GGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCA 120648 | |||| || || || |||| | | | | || ||||| ||| Sbjct 365578 ACTGTGTCGGGGTGGGCGCGCTTCTTCAGGTGGCTAA---------AGAGGAGGCAGGCA 365628 Query 120649 AAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGC 120708 ||||| |||||||| || ||||| ||||| || |||||||| |||| |||||||||| Sbjct 365629 AAGTCGGTGTGCAGACCTTCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGGCCGGGC 365688 Query 120709 ATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCC 120768 |||| ||| | |||||| |||| || | ||||| ||||| || || | ||| Sbjct 365689 ATGAGGCCCCGCTTCTTGAGCCAGAAGATCGACGCAAACGAACCCGAGAAAAAGATACCC 365748 Query 120769 TCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCAC 120828 |||||| ||||| || || | |||||| | |||| || |||| |||||| Sbjct 365749 TCCACGGCTGCAAAAGCCACAAGGCGCTCCGAGAACGAGGCACGCTTGTCCGAGATCCAG 365808 Query 120829 TTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGCAGC 120888 || |||||| |||||||||| ||| || ||| ||||| ||| || | || Sbjct 365809 CGCAGGGCCCAGTCGGCCTTTTGCTTGACGACGGGGATCGTCTCGATCGCATTAAAGAGA 365868 Query 120889 ATGTCGCGCTCGCCCTCCTC-CGCAATCAGCTGATGGATGAGCAGATTGTACATTTCCGT 120947 ||||||| || ||| || | || || | ||| || || |||| |||||| Sbjct 365869 TACTCGCGCTGCTCCGGCTCACGGATGTAGGTG-TCGATCAGGAGCGAGTACGTTTCCGA 365927 Query 120948 GTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTCCAGCTCGGGCAC 121007 ||| | | ||| |||| | || | ||||||| | | ||||| | | |||| Sbjct 365928 GTGAATGTTCTCCATCATAATCTGAAAGCCGTAAAAGCAGCGGGCCTCGGCCGCCTGCAC 365987 Query 121008 CGC-CCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGGCGGCGGCGAAGA 121066 | | |||| | | ||||| ||||| ||| ||||| | || | |||||| |||| Sbjct 365988 CTCGGCGCT-AAAGCGCTCGACCAGGTTCTCATTGACGATGCCATCCGAGGCGGCAAAGA 366046 Query 121067 ACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTC 121103 ||||||| ||||| | | |||||| ||||| | ||| Sbjct 366047 ACGCCAGGACGTGGCTCACAAAGTGGCGCTCATTGTC 366083 >seq6 Length=615380 Score = 122 bits (134), Expect = 8e-23 Identities = 146/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| |||| || ||| ||| | ||||| ||||||||||| || Sbjct 241370 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCA-TCCTCCAGCTGCTTGCCGGCAA 241428 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | || || ||||| ||||| || ||||| || |||||||| |||||| ||| | | Sbjct 241429 AGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACAT 241488 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 ||| | |||||||| | |||||| || | ||||| || || |||||||| || || | Sbjct 241489 TCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTGA 241548 Query 133648 CGAAAATCTGCATGGC 133663 |||| | |||||||| Sbjct 241549 CGAACACTTGCATGGC 241564 >seq4 Length=1186707 Score = 118 bits (130), Expect = 1e-21 Identities = 149/203 (73%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 |||| ||| ||||| || ||||| |||| || || ||| ||||||||||||||| Sbjct 399061 GGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGT--ACGGCCGTCCTCGAGCTGCTTA 399004 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || ||||| ||||| || ||||| || |||||||| |||||| | Sbjct 399003 CCGGCGAAGATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCC 398944 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | |||||| | || || || || | |||| || ||||| |||||| Sbjct 398943 TTGACATTGTCGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTCTTGCCAGTCAGA 398884 Query 133641 GTTTTTACGAAAATCTGCATGGC 133663 || || ||||| || |||||||| Sbjct 398883 GTCTTGACGAAGATTTGCATGGC 398861 >seq1 Length=1489088 Score = 89.7 bits (98), Expect = 5e-13 Identities = 127/174 (73%), Gaps = 6/174 (3%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGCCCGCG 133526 ||| ||||| || ||||| |||| || ||| ||| ||| || ||||||||||| ||| Sbjct 496540 CTCCTTCTGGATGTTGTAGTCGCTCAGCGT--ACGGCCGTCTTCCAGCTGCTTGCCGGCG 496597 Query 133527 TAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CTTGAG 133585 | || || ||||| ||||| ||||| ||||| |||||||| ||| ||| | ||||| Sbjct 496598 AAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC-CTGAATTTTGGCCTTGAC 496656 Query 133586 CTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAG 133639 | |||| |||||| | | ||| || || | |||| || ||||| || || Sbjct 496657 ATTGTCAATCGTGTCCGACGACTCGACTTCCAGCGTGATCGTCTTGCCAGTGAG 496710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420721444120