Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq8 275 9e-68 seq3 118 2e-20 seq4 93.3 6e-13 >seq8 Length=423986 Score = 275 bits (304), Expect = 9e-68 Identities = 413/570 (72%), Gaps = 20/570 (4%) Strand=Plus/Minus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 |||||||| ||| || ||| | ||||||||||| ||||| || |||||||| | Sbjct 366239 GAGCCGCTCCTGAAGGAGAACAAGTCGCGCTTTGTCCTTTTCCCTATTCGCTACCACGAG 366180 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 || ||| | |||||| || ||||| |||||||| || |||||||| || ||| | ||||| Sbjct 366179 ATCTGGCAGATGTAC-AAGAAGGCGGAGGCCTCGTTCTGGACCGCTGAAGAGATGGACCT 366121 Query 1455836 CGGCGCC-GACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 | || ||| | | |||||| ||| ||| |||| | |||||||| || | | Sbjct 366120 -GTCGAAAGACCTGCACGACTGGGACCACCGCATGAACGACAATGAGCGCCACTTTGTGA 366062 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 |||||||| || || ||| |||||| ||||||||||| |||||||||| || Sbjct 366061 GCCACGTCCTGGCGTTCTTT-GCCGCCTCGGATGGCATCGTCAATGAGAACCTGGTCGAG 366003 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||||| ||||| || | | ||||| || | |||||||| || ||||| Sbjct 366002 CGCTTTAGCGCCGAGGTGCAGGCGGCCGAGGCCCGCTGCTTTTACGGCTTTCAGATTATG 365943 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||| ||||| ||||| |||||||||||||||||||||||| || || ||| Sbjct 365942 ATGGAGAACATTCACTCGGAAACGTACTCGCTCCTGATCGACACCTACATCCGTGAGCCG 365883 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCC-GTCGGTGAGGAAAAAGGC 1456130 | || || | |||||| || ||||| ||| | || |||| | | | ||||||| Sbjct 365882 GAGCAGCGCGAGTATCTCTTTAATGCGATCGAGACGATCCCCGTCG-TCAAGCAAAAGGC 365824 Query 1456131 CGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTC 1456187 ||||||||| || |||||| |||| | | |||||| || | ||||| || Sbjct 365823 CGACTGGGCCCTGCGCTGGATCTCGGACAA-GCGTGCCTCG----TTCTCGGAGCGCCTT 365769 Query 1456188 GTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTG 1456245 || | ||||| | ||| ||||| |||||||||||||| || |||| | ||||| || Sbjct 365768 GTGGCTTTTGCAGCCGTGGAGGGTATCTTTTTCTCGGGTTCGTT-TGCGTCGATCTTCTG 365710 Query 1456246 GCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||||| |||||||||||||| || Sbjct 365709 GCTCAAGAAGCGGGGCCTCATGCCCGGCCT 365680 Score = 176 bits (194), Expect = 6e-38 Identities = 199/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 259919 GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTG 259978 ||| |||| || || || ||||| || ||||| | ||| |||| ||||||||||| || Sbjct 377606 GCGTCGCCAACCCTGTTCAATGCGGGTACGCCCCACCCTCAGATGTCGTCGTGCTTCCTT 377665 Query 259979 TTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTC 260038 | ||||||| ||||||||| |||||||| ||||||||||||||| ||| || | Sbjct 377666 GTCAGTATGAAGGACGATTCGATTGAGGGCATTTATGACACGCTCAAGACGTGTGCCATG 377725 Query 260039 ATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCC 260098 ||||||||| ||||||| ||||| || | | ||||| | || || ||||| | Sbjct 377726 ATCTCCAAGACGGCCGGTGGCATTGGCCTGAACATCCACAACATTCGTGCGACGGGCTCG 377785 Query 260099 TACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAAC 260158 ||| | || ||||| |||||| | ||||| |||||||||||||||| || | ||| Sbjct 377786 TACATTGCTGGCACAAACGGCGTGAGTAACGGTATTGTGCCCATGCTTCGTGTGTACAAC 377845 Query 260159 GACACGGCGCGCTACGTCGACCAGTGC 260185 | || ||||||||||| || ||| || Sbjct 377846 AATACCGCGCGCTACGTGGATCAGGGC 377872 Score = 132 bits (146), Expect = 7e-25 Identities = 180/246 (73%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 1456532 GAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGGC 1456591 ||||| || | || ||| | || ||| | | ||| | ||||| || |||| || ||| Sbjct 365561 GAGGCTGTGGCCATTGAGCAGGACTTTTTGACCGACGCTCTGCCCGTCTCGCTGATTGGC 365502 Query 1456592 ATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCGG 1456651 ||||||||| | || ||||||||||||||||| ||| || |||||||| ||||||| Sbjct 365501 ATGAACGCCCGC-CTGATGTGCCAGTACATTGAGTTT-GTGGCCGACCGTCTGCTCGTCA 365444 Query 1456652 CGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGATC 1456711 |||||| | ||||||||| || | || || || | |||||| || Sbjct 365443 ACCTCGGCAACCCT-AAGCACTACAACTCGACGAATCCCTTTGACTTTATGGAGAACATT 365385 Query 1456712 TCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCCAAGGCCGGC 1456770 ||||| |||||||| | |||||||||||||||||||| | ||| || ||||||||||| Sbjct 365384 TCGCTGCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTCGCCGACTATGCCAAGGCCGGT 365325 Query 1456771 GTCACC 1456776 ||| || Sbjct 365324 GTCGCC 365319 Score = 132 bits (146), Expect = 7e-25 Identities = 301/451 (67%), Gaps = 18/451 (4%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 |||||| ||||||| |||||||||||| |||||||| || |||||| | || | Sbjct 377870 GGCGGCAACAAGCGCCCAGGCGCCTTTGCCATTTACCTGGAGCCCTGGCACTCGGATGTG 377929 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 | | | | ||||| |||||||||||||||| || || | |||| ||| Sbjct 377930 TTTGAATTTATCGACCTGCGCAAGAACCACGGCAAGGAAG------AAGTGCGCGCACGC 377983 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCC-- 261965 || | || || ||||||| ||||||||||||||| ||| | ||| | | Sbjct 377984 GACTTGTTCCTCGCGCTGTGGATCCCCGACCTGTTTATGCGTCGCGT--TGAGCAGAATG 378041 Query 261966 GCGACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGG 262025 | ||||||||||| | ||||| ||||| ||||| ||| || |||||||||| || Sbjct 378042 GGGACTGGTCGCTGATGTGCCCTGCCGAGTGCCCCGGTCTGTCTGACTGCTATGGCGAGG 378101 Query 262026 CCTTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNC---GCGGACCGTCGTGC 262082 ||||| || | || ||| | ||| | ||| | Sbjct 378102 AGTTTGAAGCTTTGTACGAGCGTTACGAGCGTGAGGGGCGTGCTAAGCGCTCTGTCAAGG 378161 Query 262083 CCGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACA 262142 | ||| || || | |||| |||||| | | |||||| || ||||| || | || | || Sbjct 378162 C-GCA-GA-AGTTGTGGTACGCCATTTTGGAGGCCCAGATTGAGACGGGTAATCCGTTCA 378218 Query 262143 TGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAG 262202 | | ||||||||| | | ||||| | ||||||||| ||||||||||||| | | || Sbjct 378219 TCCTGTACAAGGACTCGGCCAACCGCAAGAGCAACCAGAAGAACCTGGGCACAATTA-AG 378277 Query 262203 AG-GCCAACCTGTGCACCGAGATCGTCCAGT 262232 || |||||||||||||||||||| || ||| Sbjct 378278 AGCTCCAACCTGTGCACCGAGATCATCGAGT 378308 Score = 125 bits (138), Expect = 1e-22 Identities = 340/509 (67%), Gaps = 26/509 (5%) Strand=Plus/Plus Query 262911 ACAGCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCA 262970 |||||| || || ||||||||| ||||| |||| | ||||| || ||| ||||| || Sbjct 378781 ACAGCACGGTCTTCGCAACTCGCTGCTCATGGCACCGATGCCGACAGCCTCGACGAGCCA 378840 Query 262971 GATCCTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGT 263030 |||||| ||| | |||| || ||| | |||||||||||| |||| ||| ||||| Sbjct 378841 GATCCTTGGCTTTAACGAGTGCTTTGAGCCCTACACGAGCAACATTTACATGCGTCGCGT 378900 Query 263031 GCTCTCGGGCGACTTTACCGTGGTCAACC---GCCACCTGGTCAAGCGCATGGTGGCGCG 263087 ||| | ||||| || |||||||||| | | |||| | | | | || | || Sbjct 378901 GCTGGCTGGCGAGTTCCAGGTGGTCAACCCGTGGCTCCTGCGCGAAC---TCGTCGAGCT 378957 Query 263088 CGGCCTGTGGACGCCCGACTTTCGCGACC---GGCTCATTGCGGCACAG-GGCTCGGTGC 263143 |||||| |||| ||||| | | | | | ||||| ||| | |||||| | | Sbjct 378958 CGGCCTCTGGA---ACGACTCTATGAAGCAAAAGATTATTGC-ACACGGCGGCTCGATCC 379013 Query 263144 AGGGCTTTGACGACGAGGAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGG 263203 || | ||| || | | | ||| ||||||| || | || ||||||||||| Sbjct 379014 AGAACATTG-----CTGGCATTCCTGACCG-CATCAAGGCGCTGTACAGGACCGTGTGGG 379067 Query 263204 AGGT--GCCCAACCGGGTGACCATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCA 263261 || | ||| || ||| | ||| || ||||| || ||||||| | | ||| || Sbjct 379068 AGATTAGCCAAA--AGGTCATCATCGACATGGCTGCGGACCGCGGCGCTTTTGTGTGTCA 379125 Query 263262 GAGCCAGTCGCTCAACCTGTACCTCGCCGACCCGA-CGGCCGAGAGCATCACGTCGATGC 263320 ||||||| |||||| | |||| | ||| | | || ||| | |||||||||| Sbjct 379126 GAGCCAGAGTCTCAACATTCACCTAAGTGCCCCAACCTTTGGACAGC-TTACGTCGATGC 379184 Query 263321 ACGCCTATGCGTGGCGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCG 263380 || || | ||| ||||||||||| ||| |||||| |||||||| || || | Sbjct 379185 ACTTTTACGGCTGGAAGAAGGGCCTCAAGACCGGCTCGTACTACCTGCGCACGCGCCCTG 379244 Query 263381 CTGCCAACGCCATTCAATTCACCGTCGAT 263409 | || | || || || |||||||| ||| Sbjct 379245 CCGCACAGGCGATCCAGTTCACCGTGGAT 379273 >seq3 Length=1323904 Score = 118 bits (130), Expect = 2e-20 Identities = 175/245 (71%), Gaps = 10/245 (4%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 |||||| | | |||||| || |||||||||||||||||| || | | ||| Sbjct 485673 TACTCGACGTACATCTACCGTGTCCTCAAGCAGGTGCACCCCGACACGGGT-----ATC- 485620 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 || |||||| | ||| | || | |||||||| || | ||||| |||| ||||||| | Sbjct 485619 TCGAACAAGGCTATGGCCATTCTCAACTCGTTCGTGCAGGACATTTTCGAGCGCATCGCC 485560 Query 725019 ACCGAGGCCGGTCGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGA 725076 ||||||||| ||| ||||| ||| ||||||| | ||| ||| |||| |||| Sbjct 485559 ACCGAGGCC--TCGAAGCTGGCCAGCTACAACAAGAAGAGCACCATCTCGTCGCGTGAGA 485502 Query 725077 TCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGG 725136 ||||||| || |||||||||||| | | || || ||| | | |||||| | | |||| Sbjct 485501 TCCAGACGGCTGTGCGCCTGATCCTCCCTGGTGAGCTGTCGAAGCACGCTATTGCTGAGG 485442 Query 725137 GCACC 725141 |||| Sbjct 485441 CCACC 485437 >seq4 Length=1186707 Score = 93.3 bits (102), Expect = 6e-13 Identities = 321/487 (66%), Gaps = 23/487 (5%) Strand=Plus/Plus Query 165441 CGACTGTTGGTCGTCGTCGGTCCGTGTTCGGCACACGACCCGGACGCCGTTGTCGAGTAT 165500 || ||| ||||||| || || || || || ||||||||||| || | ||||||| Sbjct 436117 CGCCTGCTGGTCGTAGTGGGCCCCTGCTCCATCCACGACCCGGATGCTGCCCGCGAGTAT 436176 Query 165501 GGTCGGCGGTTGCGCGCCCTCGTACGGGCCGAGGTCGACG-ACGCCCTTTGTGTGGTCAT 165559 | ||||| || | |||||| | || | | || | | | ||| |||||||| Sbjct 436177 GCGCGGCGTCTGAAGGAGG-CGTACGAGTCGCGCTGGAAGGATGGCCTG---GTGGTCAT 436232 Query 165560 ---GCGCGCCTATGTCGAAAAGCCGCGCACGACCGTTGGATGGAAGGGCCTGGCCAGTGA 165616 ||| ||||| | || ||||| ||||||||||| || ||||| |||||| || || Sbjct 436233 TATGCGGGCCTACTTTGAGAAGCCCCGCACGACCGTGGGCTGGAAAGGCCTGATCAACGA 436292 Query 165617 CCCCGATCTTGATGGCTCGTGCCGCCTGGCTGATGGCCTTGATACATCGCGCCGCCTGCT 165676 ||| | || || ||||||| || | | ||||| | ||| || |||| ||| Sbjct 436293 CCCGAACCTGGACGGCTCGTTCCAGATCAACAAGGGCCTGCA--CATTGC-CCGCAAGCT 436349 Query 165677 GCGTGATCT-CGTCGTCGACGTCGACCAACCCGTGGCCGTCGAGTTTCTCAGTCC--TCT 165733 | | ||| | | ||| ||| | || || || ||| | ||| | ||| Sbjct 436350 AC-TCATCGACATTAACGAGATCGGTCTTCCTGTTGCGTGCGAAGTGCTCGACACGATCT 436408 Query 165734 GGTGGCCC--CCTATTTGGCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACC 165791 | || ||||| | || ||| | ||||||||||| | |||||||| |||||| Sbjct 436409 CGCCGCAGTACCTAT----CCGATCTGTACGCGTGGGGCGCCATTGGTGCGCGGACCACC 436464 Query 165792 GAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAAC 165851 ||| ||| ||||||||||| | | |||| || || |||| |||||||| || ||| Sbjct 436465 GAGTCACAGCTGCACCGCGAGCTCGTATCGGGCTTGTCGATGCCGATTGGCTTTAAGAAC 436524 Query 165852 AGCACCGACGGCAGCGT-GGCGACGGCCCTCGATGCCGTGCGCACTGCCGCCCAGCCACA 165910 ||||||||| | | |||| ||| | |||||| | ||| | | ||||||| || Sbjct 436525 TCGACCGACGGCGGTATCGGCG-TGGCTGTGGATGCCATCCGCGCGTCGTCCCAGCCCCA 436583 Query 165911 CACCTTT 165917 | | ||| Sbjct 436584 CGCGTTT 436590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177809946126106