Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8 201 1e-46 >seq8 Length=423986 Score = 201 bits (222), Expect = 1e-46 Identities = 905/1411 (64%), Gaps = 51/1411 (4%) Strand=Plus/Minus Query 110704 CAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 110763 || ||| ||||| | ||||| || |||||||| || ||| || | ||| || || Sbjct 378892 CATGTAAATGTTGCTCGTGTAGGGCTCAAAGCACTCGTTAAAGCCAAGGATCTGGCTCGT 378833 Query 110764 GGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCG 110823 |||||||| ||||| |||||||| | || ||| |||||||| | || || | Sbjct 378832 CGAGGCTGTCGGCATCGGTGCCATGAGCAGCGAGTTGCGAAGACCGTGCTGTGCAATCTG 378773 Query 110824 TTCCTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAAC 110881 ||||||| ||| || ||| | | | ||| | |||| |||||||| | Sbjct 378772 GGCCTTGAGCGAGGTCCAATCCCATAGGTCCG-TCGGTGTGCGGTTCC-ACATGTCATAT 378715 Query 110882 TGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA 110941 || | | || || || || ||| ||||| |||| || |||| || | | | Sbjct 378714 TGCAAAAGGCCCTGCGAGGCAGGACTGCCCTCGTAGGTCTCGTAGGGGCCGTACTCGGCC 378655 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 |||| || ||||| ||| |||| ||| || || || || ||||| || | | ||| Sbjct 378654 GCCAGCTCGCAGCTGCGCTCAAGGGCTGCATGGTAGATTGTCTCAAATATTTGCACGTTC 378595 Query 111002 ATCTCCTTGGCTTCAT--CTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGA 111059 | || || | ||| ||||| | |||| | ||||| | ||||| | Sbjct 378594 AGGAGACGAGCCTCCTGGCTG--TCAAACGGATAGCCCATGATCATAAAAGCGTCCGCCA 378537 Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAA 111119 | || |||||||| | ||| || || | ||| |||||||| || || || |||| | Sbjct 378536 GGCCCTGAACACCGATACCGATGGGGCGGTGGCGCATATTCGAGCGACGTGCGCTCTCCA 378477 Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179 |||| || | || |||| |||| ||||| || || ||| || | ||| | | | Sbjct 378476 CGGGGTAGTAGTTAATGTCGATGATGCGGTTCAGGTTCTTGCACACCACCTTCGACACAT 378417 Query 111180 CATG----------AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTT 111229 | || ||||| | | | | | | || ||| ||||| | | || | Sbjct 378416 CGTGCAGGCGCTGGAAGTTGTACGTCTTGGAC-GCGCCAGTGCCTTCAATAA---ACGTC 378361 Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || || ||||| || |||| ||||| || |||||||| ||| ||||||| | Sbjct 378360 GGCAGAGCGATCGAGGCCAGGTTGCATACGGCCGTCTCTTCCGGCGAGCTGTACTCGATG 378301 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | |||||| |||||||| || |||| ||||| ||||| ||||| | Sbjct 378300 ATCTCGGTGCACAGGTTGGAGCTCTTAATTGTGCCCAGGTTCTTCTGGTTGCTCTTGCGG 378241 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||| || |||||||| || ||| | || | |||||||| |||| | | | ||| Sbjct 378240 TTGGCCGAGTCCTTGTACAGGATGAACGGATTACCCGTCTCAATCTGGGCCTCCAAAATG 378181 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468 || | ||| ||| || ||| || | ||| | || || || ||||| |||||| Sbjct 378180 GCGTACCACAACTTCTGCGCCTTG-ACAGAGCGCTTAGCACGCCCCTCACGCTCGTAACG 378122 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTG 111527 ||| | |||||||||||||| ||| || ||| || ||||| || || | | | Sbjct 378121 CTCGTACAAAGCTTCAAACTCCTC-GCCATAGCAGTCAGACAGACCGGGGCACTCGGCAG 378063 Query 111528 GACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC 111587 | || | || ||||| | ||| | |||||| || ||| || ||||| || |||| Sbjct 378062 GGCACATCAGCGACCAGTCCCCATTCTGCTCAACGCGACGCATAAACAGGTCGGGGATCC 378003 Query 111588 ACA--GGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||| | || ||| | || || | || | ||||| | || ||||| || | Sbjct 378002 ACAGCGCGAGGAACA-AG-TCGCGTGCGCGCACTTCTTCCTTGCCGTGGTTCTTGCGCAG 377945 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 111702 || | || || | | ||||| |||||| ||||| || || | || | | || Sbjct 377944 GTCGATAAATTCAAACACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGCCTGG 377885 Query 111703 ---CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758 ||| | | ||||| |||| || |||||||| || ||| | || ||||||| Sbjct 377884 GCGCTTGTTGCCGCCC----TGATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCA 377829 Query 111759 TTGGAATAATACCAT--CTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCT 111814 | || | |||||| | || | || ||||| || || |||||| | || Sbjct 377828 TGGGCACAATACCGTTACTCA--CGCCGTTTGTGCCAGCAATGTACGAG--CCCGTCGCA 377773 Query 111815 CTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCC 111874 | | | ||||||| || ||||| || || ||| ||| ||||| |||||| | Sbjct 377772 CGAATGTTGTGGATGTTCAGGCCAATGCCACCGGCCGTCTTGGAGATCATGGCACACGTC 377713 Query 111875 GTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTG 111934 | || || |||| || || | || || || ||||| | || ||||||||| Sbjct 377712 TTGAGCGTGTCATAAATGCCCTCAATCGAATCGTCCTTCATACTGACAAGGAAGCACGAC 377653 Query 111935 GACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA 111994 |||||||| || || ||||| |||||||| |||||||| | ||||| |||| | Sbjct 377652 GACATCTGAGGGTGGGGCGTACCCGCATTGAACAGGGTTGGCGACGCGTGCGTGAA-AGC 377594 Query 111995 CCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 112053 | | | |||||| | || ||| ||||| | | || | || || || |||||||| || Sbjct 377593 CTTCTCGGACATGTAGTTGTACGTCTCAATGGCACTCTTGATATCCTCGCCGTGGATACC 377534 Query 112054 GATTGCGACCCGCATGAACATGTACTGTGGG 112084 | || || ||||||| ||||| ||| ||| Sbjct 377533 AACAGCCACACGCATGAGCATGTGCTGAGGG 377503 Score = 113 bits (124), Expect = 6e-20 Identities = 306/457 (67%), Gaps = 10/457 (2%) Strand=Plus/Plus Query 122369 CATAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCA 122428 ||||||| |||| || ||| || ||||| | ||| || | || |||||| |||| Sbjct 365336 CATAGTCGGCGACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCA 365395 Query 122429 TAAAGTCAAATGGATTCTTCGCGTTCCAAATGGGT--GGCACCCCAACTTGTTTGAGGAG 122486 |||||||||| |||||| ||| ||| | || | || || | ||| ||| || Sbjct 365396 TAAAGTCAAAGGGATTCGTCGAGTTGTAG-TGCTTAGGGTTGCCGAGGTTGAC-GAGCAG 365453 Query 122487 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTT 122546 ||| || | |||| |||||||||||| | ||||| | |||||| || || || Sbjct 365454 ACGGTCGGCCACAAACTCAATGTACTGGCACATCAGGCGGGCGTTCATGCCAATCAGCG- 365512 Query 122547 ACATGGG-AGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605 | | ||| || ||||| | || | | |||||| | || ||||| | | |||| Sbjct 365513 AGACGGGCAGAGCGTCGGTCAAAAAGTCCTGCTCAATGGCCACAGCCTCCGTAATGATGC 365572 Query 122606 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCT-TGAAGAGCTCCACGGCAAAC 122664 || | || |||| ||||| | | | || | ||||| |||||| Sbjct 365573 GGTTCACTGTGTCGGG-GTGGGCGCGCTTCTTCAGGTGGCTAAAGAGGAGGCAGGCAAAG 365631 Query 122665 TCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATG 122724 || ||| ||||| || || || ||||| || || || ||||| | || || |||||| Sbjct 365632 TCGGTGTGCAGACCTTCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGGCCGGGCATG 365691 Query 122725 AGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTC 122783 || ||||||||||| | ||| | || | |||| || || || ||||| ||||||||||| Sbjct 365692 AGGCCCCGCTTCTTGAGCCAGAAGATCGACGCA-AACGAACCCGAGAAAAAGATACCCTC 365750 Query 122784 CACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAG 122820 ||| ||||| || | |||||| || | ||| ||| Sbjct 365751 CACGGCTGCAAAAGCCACAAGGCGCTCCGAGAACGAG 365787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031897944800