Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq5 205 3e-47 seq1 96.9 1e-14 >seq5 Length=620091 Score = 205 bits (226), Expect = 3e-47 Identities = 917/1439 (64%), Gaps = 33/1439 (2%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || || || || ||||| || || |||||||| || || ||||| || || ||| Sbjct 299994 GCTGTTGGTATTGACTTGGGTACGACCTACTCTTGTGTGGCCGTCTGGCAGAACGACCGT 300053 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || | ||||| ||||| || || ||| | || || || || ||||| || || ||| Sbjct 300054 GTCGAGGTCATTGCCAATGACCAGGGCAACCGTACGACCCCCTCGTACGTCGCCTTCACC 300113 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||||||||| |||| ||||| | || || || || | || || || | || Sbjct 300114 GACACTGAGCGTCTGATCGGTGACGCCGCCAAGAACCAGGTGGCCATGAACCCCCACAAC 300173 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTC--TGACAAATCTACACAA 349435 || || || || |||||||| || || || | ||||| | || | || | || Sbjct 300174 ACTGTCTTCGACGCTAAGCGTCTGATCGGCCGCAAGTTCAGCGATGCCGAAGTT---CAG 300230 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGA---TAAACCAATT 349492 || || | || || | || || | || | ||| ||| ||| || | Sbjct 300231 TCGGACATGAAGCACTGGCCCTTCGCCGTCATC------GACCGTGCCGGTAAGCCTGTC 300284 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC--GAAGAAATTTCATCAA 349550 ||| ||||| || || ||||| | || | ||| |||| || || ||||| || | Sbjct 300285 ATTCGCGTTGAGTACAAGGGTGAGGAGAAG--ACTTTCACCCCTGAGGAGATTTCCTCCA 300342 Query 349551 TGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGG-TGAAACAGTAACTGAT 349609 |||| | | || ||| || | || || || || | || | || || | || Sbjct 300343 TGGTCCTCCTCAAGATGCGTGAGACCGCCGAGGCTTACCTGGGCTCGGAC-GTGAAGGAC 300401 Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || || | ||||| || ||||| || || || | |||||| || || || || ||| Sbjct 300402 GCCGTGGTCACTGTCCCTGCCTACTTCAACGACTCGCAGCGTCAGGCCACCAAGGACGCT 300461 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || ||| | | || || || || ||||||||||| || ||| Sbjct 300462 GGTGTCATTGCCGGTCTGAACGTTATGCGTATCATCAACGAGCCCACTGCTGCTGCCATT 300521 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || || || || | | ||| | || || || | ||||| || || | ||| Sbjct 300522 GCCTACGGTCTCGACAAGAAGGACGACAAGGAGAAGAACGTCCTTATCTTCGACCTGGGT 300581 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 |||||||| |||||||| || || || || | || ||||| || || || || || || Sbjct 300582 GGTGGTACCTTTGATGTGTCGCTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGGCC 300641 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 ||||| ||||| || || | ||||| || || ||||| || ||||| || || ||| Sbjct 300642 ACTGCCGGTGACACTCACTTGGGTGGTGAGGACTTTGACAACCGTCTGGTCAACCACTTT 300701 Query 349910 GTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968 || ||||||| ||||| |||| || | || | || || | || | || Sbjct 300702 GTGCAAGAATTCAAGCG-CAAGAACAAGAAGGACCTGACCACGAACGCTCGTGCTCTCCG 300760 Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTC 350028 ||| || | ||||| | || ||||| ||||| | | || || | |||| ||| | Sbjct 300761 TCGTCTGCGCACTGCTTCGGAGCGTGCCAAGCGCACTCTCTCGTCGGCCGCCCAGACCAC 300820 Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088 ||||| ||||| || || || || | || |||| | || || || ||||| || Sbjct 300821 CATTGAGATTGACTCGCTCTTCGAGGGTATCGACTTCTACACTTCGATCACTCGTGCCCG 300880 Query 350089 GTTTGAAGAATTATGTATGGATCT-TTTTAGAGCAACAATGGATCCTGTGGAAAAAGTAT 350147 || || || | || || || || | | | || || || |||||||| || || Sbjct 300881 CTTCGAGGAGCTTTGCGGTGACCTCTTCTCGCAC-ACCATTGACCCTGTGGAGAAGGTGC 300939 Query 350148 TAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTT----TAGTTGGTGGT 350203 | || || || || ||| | | | |||| || || | || |||||| Sbjct 300940 TCCGCGACGCCAAGATTGACAA----GGGCTCGGTGAACGAGATTGTCCTGGTCGGTGGT 300995 Query 350204 TCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCT 350263 || || ||||| || || || || | || || ||||| || ||| || ||| Sbjct 300996 TCGACCCGTATCCCTCGTGTGCAGAAGCTGCTCCGCGACTTTTTCAACGGCCGCGAGCCT 301055 Query 350264 TCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATT 350323 | || || || || || || |||||||| || ||||| ||||| ||||| | ||| Sbjct 301056 AACAAGTCGATCAACCCCGACGAGGCTGTTGCTTACGGTGCCGCTGTCCAGGCCGCCATT 301115 Query 350324 TTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTT 350383 | || || | | | || | | || || || || || ||||| | || ||| Sbjct 301116 CTGTCGGGTGACACGTCCGAGAAGACGCAGGACCTCTTGCTGCTCGATGTCGCCCCTCTT 301175 Query 350384 TCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACT 350443 ||| | || | || || |||||| || | ||| ||| || | || | ||| Sbjct 301176 TCGATGGGTATCGAGACCGCTGGTGGTGTCTTCACTCCTCTGATCAAGCGTAACACTACG 301235 Query 350444 GTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACA 350503 || ||||| || ||||| | || || || | || || || ||||| | || Sbjct 301236 GTGCCTACCAAGAAGTCGGAGGTCTTCTCGACTTACGCCGACAACCAGCCTGGTGTGTTG 301295 Query 350504 ATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTT 350563 || || || || || ||||| ||||| ||||| || || || || || || | ||| Sbjct 301296 ATCCAGGTGTTCGAGGGTGAGCGTGCCCGCACCAAGGACAACAACCTGCTGGGTAAGTTT 301355 Query 350564 ACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGA 350622 || | ||||| || ||| | || || |||||||| |||||| | ||||| Sbjct 301356 GAGCTCTCGGGCATTCCCCCGGCGCCGCGTGGTGTCCCTCAGATCGAAGTCACCTTCGA 301414 >seq1 Length=1489088 Score = 96.9 bits (106), Expect = 1e-14 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || || || ||||| || ||| || || || || || || Sbjct 496505 CCACCACGAAGGCGCAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 496564 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || || ||||| || || || || || ||||| ||||| || || || |||||| Sbjct 496565 AGCGTACGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCCGGAGGA 496624 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 || || || || ||||||||||| || || ||||| ||||||| || || | || ||| Sbjct 496625 ATGCCCTCCTTGTCCTGAATTTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACT 496684 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAG 140716 || || || | ||||| || || || Sbjct 496685 TCCAGCGTGATCGTCTTGCCAGTGAG 496710 Score = 87.8 bits (96), Expect = 5e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681 || |||||||| || || || ||||||||||| || || ||||| ||||||| || || Sbjct 497236 TCCGGAGGAATGCCCTCCTTGTCCTGAATTTTGGCCTTGACATTGTCAATCGTGTCCGAC 497295 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || ||||| || || | ||||| || || |||||||| ||||| || ||||| Sbjct 497296 GACTCGACTTCCAGCGTGATCGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 497351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254147615439