Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq8 297 2e-75 seq3 152 6e-32 >seq8 Length=423986 Score = 297 bits (328), Expect = 2e-75 Identities = 529/767 (69%), Gaps = 4/767 (1%) Strand=Plus/Plus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239 |||||| | | ||||||| || || | ||||||||||| || || || | ||| | Sbjct 377504 CCTCAGCACATGCTCATGCGTGTGGCTGTTGGTATCCACGGCGAGGATATCAAGAGTGCC 377563 Query 53240 CGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTC 53299 |||||||||| ||| ||| | | ||| || |||||||| |||||||||||||| Sbjct 377564 ATTGAGACGTACAACTACATGTCCGAGAAGGCTTTCACGCACGCGTCGCCAACCCTGTTC 377623 Query 53300 AACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359 || || |||||| ||||||||||||||| |||||||| || |||||||| || Sbjct 377624 AATGCGGGTACGCCCCACCCTCAGATGTCGTCGTGCTTCCTTGTCAGTATGAAGGACGAT 377683 Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419 ||||| || ||||| || || ||||||||| ||||||| ||||||||| | | ||| Sbjct 377684 TCGATTGAGGGCATTTATGACACGCTCAAGACGTGTGCCATGATCTCCAAGACGGCCGGT 377743 Query 53420 GGTATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479 || || || | || | ||| | ||||||| ||| | || || || ||| Sbjct 377744 GGCATTGGCCTGAACATCCACAACATTCGTGCGACGGGCTCGTACATTGCTGGCACAAAC 377803 Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539 ||||| | || || ||||| ||||| || || | |||||| || || || ||||| Sbjct 377804 GGCGTGAGTAACGGTATTGTGCCCATGCTTCGTGTGTACAACAATACCGCGCGCTACGTG 377863 Query 53540 AACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599 | ||||| || |||||| || | || ||||| ||||| ||||| |||||| | Sbjct 377864 GATCAGGGCGGCAACAAGCGCCCAGGCGCCTTTGCCATTTACCTGGAGCCCTGGCACTCG 377923 Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGT 53659 || | | || ||| |||| ||||| ||| || || | ||||| ||||| || Sbjct 377924 GATGTGTTTGAATTTATCGACCTGCGCAAGAACCACGGCAAGGAAGAAGTGCGCGCACGC 377983 Query 53660 GACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAG 53719 ||| |||| || |||||||| || ||||| || |||| || ||| || | | | Sbjct 377984 GACTTGTTCCTCGCGCTGTGGATCCCCGACCTGTTTATGCGTCGCGTTGAGCAGAATGGG 378043 Query 53720 GAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCT-CCAGGGTGTCTACGGTGAGGA 53778 || |||| ||||||||||| |||||||||||| || | | || ||| || ||||| Sbjct 378044 GACTGGTCGCTGATGTGCCCTGCCGAGTGCCCCGGTCTGTCTGACTG-CTATGGCGAGGA 378102 Query 53779 GTTTAACGAGATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGG 53837 |||| | | |||| || || |||| | |||| || ||| ||||||| Sbjct 378103 GTTTGAAGCTTTGTA-CGAGCGTTACGAGCGTGAGGGGCGTGCTAAGCGCTCTGTCAAGG 378161 Query 53838 CGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGT 53897 ||| || | ||| | || || | || |||| | |||||||| | |||| ||| Sbjct 378162 CGCAGAAGTTGTGGTACGCCATTTTGGAGGCCCAGATTGAGACGGGTAATCCGTTCATCC 378221 Query 53898 GCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944 |||||||| |||| |||| |||||||||||||||||| | ||| Sbjct 378222 TGTACAAGGACTCGGCCAACCGCAAGAGCAACCAGAAGAACCTGGGC 378268 >seq3 Length=1323904 Score = 152 bits (168), Expect = 6e-32 Identities = 234/333 (70%), Gaps = 8/333 (2%) Strand=Plus/Plus Query 118013 AGCCCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTAC 118072 ||||||||||| ||||| || || | |||| || |||||||||||||||| |||||| Sbjct 259393 AGCCCCTTGATGTGGGAGCCATCAAAATCCTGGTCCGTCATGATCATCAGGCTGCCGTAG 259452 Query 118073 CGTAAATCTCTCAGGGAGTTATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTTAAGG 118132 || | | || | | || ||||| || || || || || || || | |||| | Sbjct 259453 CGCAGGCCGTCCACGCTCGTGTACACCTTGCCGTGCTGCAGGCCCAGAATTTCCTTAATG 259512 Query 118133 TTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATGGTG----GCGTCCCGAACGTTGCG 118188 | | || |||| | | | | ||| || ||| || || || || ||| | Sbjct 259513 TGCTTGATCTCTGCATTCTTCATGA----TTTGATCGTGAGATGCCTCTCGTACATTGAG 259568 Query 118189 CGGCTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCACAACGCTCAAGCCGGC 118248 | |||||| ||||| |||||||| || || |||||||||||| |||| | || | Sbjct 259569 CAACTTACCGCGCAGCGGAAACACACCGTACGCGTCACGGCCCACCTCGCTGATACCAGA 259628 Query 118249 AATAGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCACTCGGTGCTGCG 118308 || ||||| ||||| ||||||||||| || || | || || |||||||||| |||||| Sbjct 259629 AACGGCAAGCGCCTTGGCCGAGTCACCTTCTGTGAGGATCAGCGTGCACTCGGCGCTGCG 259688 Query 118309 ATGAGTACCGGCCCAATTAGCATCATCCAGCTT 118341 | || ||||||||||| ||||| || ||||| Sbjct 259689 CTTCGTGCCGGCCCAATTGGCATCCTCTAGCTT 259721 Score = 138 bits (152), Expect = 1e-27 Identities = 205/289 (71%), Gaps = 4/289 (1%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACC--TGCCAGCCGCGTTCCAAACT 152086 ||||||||||| |||| |||||||||||| || ||||| | | | ||||| ||||||| Sbjct 258658 GTGAAGATGTAACGGGCGCTGGCCGCATCTTTTCCACCCATACTA--CGCGTGCCAAACT 258715 Query 152087 GTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCA 152146 | ||| ||| ||| | || | |||||| ||| || | ||| || | || Sbjct 258716 GGCCATTCGGCATGAGCATATTCACATTGTTGCTGCCGCAAAAGTCCTGCGCGAGTCCCA 258775 Query 152147 CAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATC 152206 |||| || | ||||||| ||||| ||||| |||||||| || || | || ||| | Sbjct 258776 CAATGGTCATCACCAGACTCTGATCACCATGGTGGTACGCCGTGTGTTCAGAGACGTAAC 258835 Query 152207 CCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCA 152266 || || |||| |||||| || || ||| | ||||| ||||| ||| | | | || Sbjct 258836 CCTGCAGCTGCTGCACCTTGATTTCTGTCTTTAGGTTGCGCTTGAAGCAGCCAAACAGCA 258895 Query 152267 CCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACG 152315 | |||||||| ||| ||||||||||||||||| |||||| || || Sbjct 258896 CTTTGCGCTGTCCTGGCTTCAAACCGTCCACCACACTAGGAATGGAGCG 258944 Score = 134 bits (148), Expect = 2e-26 Identities = 242/349 (69%), Gaps = 16/349 (5%) Strand=Plus/Plus Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828 ||||| || || ||||||||||| || || |||| |||| ||| |||||||||||||| Sbjct 259383 GTTGATGATCAGCCCCTTGATGTGGGAGCCATCAAAATCCTGGTCCGTCATGATCATCAG 259442 Query 152829 ACGACCGTAGCGCAGGTCACGTAGTGACCCGTAGACCTTTCCATGTTGAAGCCCGAGGAT 152888 | |||||||||||| | | | ||| ||||| || || || || || || || Sbjct 259443 GCTGCCGTAGCGCAGGCCGTCCACGCTCGTGTACACCTTGCCGTGCTGCAGGCCCAGAAT 259502 Query 152889 ---CTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTG-TTTCACCGTG----GCA 152940 ||| || | ||| | || |||| | ||| || ||| | |||| || Sbjct 259503 TTCCTTAATGTGCTTG---ATCTCTGCATTCT---TCA--TGATTTGATCGTGAGATGCC 259554 Query 152941 TCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTACA 153000 || || |||||| || ||| || || || |||||||| ||| |||||| ||||| || Sbjct 259555 TCTCGTACATTGAGCAACTTACCGCGCAGCGGAAACACACCGTACGCGTCACGGCCCACC 259614 Query 153001 ACGCTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTA 153060 |||| | ||| | || ||||| || || ||||||||||| || |||| || ||||| Sbjct 259615 TCGCTGATACCAGAAACGGCAAGCGCCTTGGCCGAGTCACCTTCTGTGAGGATCAGCGTG 259674 Query 153061 CAGTCGTGAGACCGATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109 || ||| || | || |||||||| ||||| || || ||||||| Sbjct 259675 CACTCGGCGCTGCGCTTCGTGCCGGCCCAATTGGCATCCTCTAGCTTGG 259723 Score = 118 bits (130), Expect = 1e-21 Identities = 192/276 (70%), Gaps = 8/276 (3%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||| |||||||| | ||| || ||||| || ||||| | |||||| || || || Sbjct 258658 GTGAAGATGTAACGGGCGCTGGCCGCATCTTTTCCACCCATACTACGCGTGCCAAACTGG 258717 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 ||| ||||| | | |||| |||||| ||| ||||| || || | ||| Sbjct 258718 CCATTCGGCATGAGCATATTCACATTGTTGCTGCCGCAAAAGTCCTGCGCGAGTCCCACA 258777 Query 117425 ATCGT----ACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTA 117480 || || ||| || ||| ||||||||||| |||||||| || || | ||||| Sbjct 258778 ATGGTCATCACC----AGACTCTGATCACCATGGTGGTACGCCGTGTGTTCAGAGACGTA 258833 Query 117481 GCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAAT 117540 ||| |||||| |||||| || |||| | | ||||| ||||| |||| || | | Sbjct 258834 ACCCTGCAGCTGCTGCACCTTGATTTCTGTCTTTAGGTTGCGCTTGAAGCAGCCAAACAG 258893 Query 117541 CACCTTGCGCTGACTTGGCTTCAGACCATCCGCCAC 117576 ||| |||||||| | |||||||| ||| ||| |||| Sbjct 258894 CACTTTGCGCTGTCCTGGCTTCAAACCGTCCACCAC 258929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215911077400