Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 9e-14 seq4 89.7 3e-13 seq6 84.2 1e-11 >seq1 Length=1489088 Score = 91.5 bits (100), Expect = 9e-14 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | ||| |||| ||| | || || ||||||||||| || ||||| || || Sbjct 496504 GCCACCACGAAGGCGCAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCT 496563 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || ||||||| || || || ||||| || || | ||||||||||||||| || Sbjct 496564 CAGCGTACGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCCGGAGG 496623 Query 34599 CACTCCCTCCTTGTC 34613 | ||||||||||| Sbjct 496624 AATGCCCTCCTTGTC 496638 >seq4 Length=1186707 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || || ||||||||||| |||||||| || || || || || |||| || || || Sbjct 399066 TGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCCTCGAGCTGC 399007 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 |||||||| || || | ||||||||||||||| || | ||||||||||| |||||| Sbjct 399006 TTACCGGCGAAGATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT 398948 >seq6 Length=615380 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| | || |||||||||||||| || ||||| || || || || || Sbjct 241344 AGACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGA 241403 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || |||||||| || | |||||||||||||| || | |||||| Sbjct 241404 CCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCC 241463 Query 34609 TTGTCTGTGATCTT 34622 ||||| |||||| Sbjct 241464 TTGTCCTGGATCTT 241477 Score = 82.4 bits (90), Expect = 5e-11 Identities = 112/155 (72%), Gaps = 1/155 (1%) Strand=Plus/Minus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | | ||| | ||| | |||||| ||||||||||| ||||| || || || Sbjct 150935 CGCCACCGCGCAAACGAAGCACGAGATGGAGCGTGCTCTCCTTCTGAATATTGTAGTCAC 150876 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 | |||||| | || || || || || || ||||| || | || ||||||||||| | Sbjct 150875 TCAATGTTCGTCCATCCTCCAGCTGCTTTCCCGCAAAAATCAGGCGTTGTTGGTCCGGTG 150816 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC 34632 | | ||| |||||||| |||| || ||||| || Sbjct 150815 GGATTCCTTCCTTGTCCTGGATC-TTGGTTTTCAC 150782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729550135029