Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq6 104 5e-17 seq4 86.0 1e-11 seq1 84.2 5e-11 >seq6 Length=615380 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| |||||||| ||| || ||||||||||| ||| | ||| | ||||| Sbjct 241350 AGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCC 241409 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| || | ||| ||||||| | ||| || ||||| || Sbjct 241410 TCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCC 241469 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| |||| | |||| ||| ||| || ||||| || || || Sbjct 241470 TGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 241529 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| ||||| || ||||| Sbjct 241530 TTCCCGGTCAGGGTCTTGACGAACACTTGCAT 241561 >seq4 Length=1186707 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972 ||| || || |||||||| ||| | || | || || || || || |||||||| Sbjct 399055 CTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCCTCGAGCTGCTTACCGGCGAA 398996 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 ||| || | ||| ||||||| | ||| || ||||| || || || || |||||| | Sbjct 398995 GATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATT 398936 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || | ||||||| || || ||||| || || || ||||| || |||||||| || Sbjct 398935 GTCGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTCTTGCCAGTCAGAGTCTTGAC 398876 Query 152093 GAAGACCTGCAT 152104 ||||| ||||| Sbjct 398875 GAAGATTTGCAT 398864 >seq1 Length=1489088 Score = 84.2 bits (92), Expect = 5e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || ||||| || ||| || ||||||||||| ||| | || | || ||| Sbjct 496520 AGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGCCGTCT 496579 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||| ||||||| | || || ||||| || Sbjct 496580 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 496639 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| |||||| | || | |||| || ||| ||||| || || || || Sbjct 496640 TGAATTTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACTTCCAGCGTGATCGTC 496699 Query 152073 TTGCCCGTGAG 152083 ||||| ||||| Sbjct 496700 TTGCCAGTGAG 496710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820607816723