Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq6 147 2e-30 seq4 140 2e-28 seq1 120 2e-22 >seq6 Length=615380 Score = 147 bits (162), Expect = 2e-30 Identities = 159/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| |||||||| ||||||||||| ||||||||||| ||| || ||| | || || Sbjct 241352 CACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTC 241411 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| ||||||||||||| ||||| || || | || | ||| ||||| ||| Sbjct 241412 CAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTG 241471 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | || ||||||| || |||||||| | || |||||||| Sbjct 241472 GATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTT 241531 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || |||||||| ||||| | ||||||| Sbjct 241532 CCCGGTCAGGGTCTTGACGAACACTTGCATG 241562 >seq4 Length=1186707 Score = 140 bits (154), Expect = 2e-28 Identities = 160/213 (75%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||||||||||| || |||||||| ||| || || |||| || Sbjct 399073 CACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCCTC 399014 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||||| |||||| || || | || | ||| ||||| ||| Sbjct 399013 GAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTG 398954 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | || ||||| | |||||| ||||| | ||| |||||| Sbjct 398953 GATCTTGGCCTTGACATTGT--CGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTC 398896 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || || ||||| ||||||||||||||| Sbjct 398895 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 398863 >seq1 Length=1489088 Score = 120 bits (132), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||| |||||||||||||||||||| ||||||||||| ||| || || |||| Sbjct 496519 CAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGCCGTC 496578 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 ||||||||||| ||||| ||||||| |||||| || || | ||| | || ||||| || Sbjct 496579 TTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 496638 Query 44245 CGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 | || || ||| || ||| | || ||||| | || || || |||| ||| ||| Sbjct 496639 CTGAATTTTGGCCTTGACATTGT--CAATCGTGTCCGACGACTCGACTTCCAGCGTGATC 496696 Query 44303 GTCTTTCCCGTGAG 44316 ||||| || ||||| Sbjct 496697 GTCTTGCCAGTGAG 496710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990342964021