Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1121 150 4e-31 seq775 109 1e-18 >seq1121 Length=2436 Score = 150 bits (166), Expect = 4e-31 Identities = 576/881 (65%), Gaps = 35/881 (4%) Strand=Plus/Minus Query 229758 GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAACTTTCTG 229817 |||||| |||| || | ||| || ||| | |||||||||||||||| ||| | ||||| Sbjct 1041 GTTCCCCATCCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCGGAGGCGTCCTTCTG 982 Query 229818 GACCACTGAGGAAGTTCCTCTGAACGCAGACGTCGTCGACTGGCGTGAGAAACTCAATGA 229877 |||| | |||||| || ||| | ||| | ||||||| | || | || Sbjct 981 GACCGCCGAGGAAATTGACCTGTCCAAGGACCTGCACGACTGGGACCACCGCCTGACGGA 922 Query 229878 CGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCGATGGTATTGT 229937 | | || || || || |||| ||| |||| | || || || | || || ||||| || Sbjct 921 CAATGAGCGCCACTTTATCAGCCACGTCCTTGCGTTCTTTGCGGCGTCGGACGGTATCGT 862 Query 229938 GATGGAAAATCTGCA-GACCAACTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCAAT 229996 || || || ||| || | |||||| | || || || | ||||| || | Sbjct 861 GAACGAGAACCTGGTCGAGCG-CTTTAGCGCCGAGGTGCAGGCCGCCGAGGCGCGCTGCT 803 Query 229997 TTTATGCTTACCAAACATTCAACGAATCTATCCATTCTGAACAATATGCTCTGCTTATCG 230056 | || | || ||| | | | || ||||| || || || | || ||||||| Sbjct 802 TCTACGGTTTCCAGATCATGATTGAGAACATCCACTCGGAGACCTACTCGCTCCTTATCG 743 Query 230057 ACGCGCTTATTTCCGACGAGCAAGAACGGAACGAGCTTTTTG----ATGCCATTGAAAAC 230112 || || || |||| ||||| || | | ||| ||||||| ||||||| || | | Sbjct 742 ACACG--TACATCCG-CGAGCCCGAGCAGCGCGA-CTTTTTGTTCAATGCCATCGAGACC 687 Query 230113 ATCCCGGCGGTTCATAACAAGGCAAAGTGGGCTCAGAAATGGCT-AGA-ACCTG-GTAAA 230169 ||||||| ||| | | ||||| ||||||| | | ||| | || || | | Sbjct 686 ATCCCGGTGGTGAAGCAAAAGGCCGAGTGGGCGCTGCGCTGGATCAGCGACAAGCGCGCC 627 Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGT 230229 ||||| | |||||||| || || | | ||||| || || | || || || Sbjct 626 TCGTTCTCGGAGCGTCTTGTGGCGTTTGCCGCCGTTGAGGGCATCTTCTTCTCGGGCTCG 567 Query 230230 TTCTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCT-- 230286 || |||| |||||||||||||| ||| || ||||||| ||||| |||| ||| Sbjct 566 TT-TGCGTCCATCTTTTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCT--GTCTTTCTCG 510 Query 230287 AACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCA 230346 |||||| |||| ||||||||||| || || || | | ||| || | || Sbjct 509 AACGAGCTCATTTCCCGCGACGAGGGCCTGCA-CACCGACTTTGCGTGCCTGCTCTTT-- 453 Query 230347 AAGCTCCAGAACAAGCT-----ACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAG 230401 | | || ||| |||| ||| ||| ||||| || | |||||||| || || | Sbjct 452 AGCCACCTGAAGAAGCGCGCGCACCC--CGACACGGTGAACCGGATCATTACCGAGGCCG 395 Query 230402 TTGAAAACGAAAAGGAGTTCATTTGT--GACGCTATTCCA-TGTCGCCTTATTGGCATGA 230458 | | ||| |||| || ||||| ||||| | || |||||| | |||||||||| Sbjct 394 TCTCGATCGAGCAGGACTT--TTTGTCCGACGCGCTGCCCGTGTCGC-TGATTGGCATGA 338 Query 230459 ACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTG 230518 |||| || ||| | |||||||| || || || || |||||| | |||| || || | Sbjct 337 ACGCGCGCCTGATGTGCCAGTACATTGAGTTTGTTGCGGACCGCCTGCTTGTGGCGCTCG 278 Query 230519 GTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTC 230578 | || ||| |||||| | | ||||||||| | ||||||||| ||||||||| | Sbjct 277 GCAACCCGAAGCACTACAACGCCACGAACCCCTTCGACTTTATGGAGAACATTTCGCTGC 218 Query 230579 AAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTAT 230619 | || ||| | ||||| ||||| || ||| | |||||| Sbjct 217 AGGGCAAGTCGAACTTTTTCGAGCGCCGCGTCGGCGACTAT 177 >seq775 Length=13278 Score = 109 bits (120), Expect = 1e-18 Identities = 373/577 (65%), Gaps = 31/577 (5%) Strand=Plus/Plus Query 319459 TGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCAC 319518 |||| ||| ||| || || ||| |||||| ||||||||| ||||| || | | Sbjct 1569 TGGAGAATGTCGGTACACACGTCGTTCAGGAACTTGGAGTCGTGCGACACGATGATCGAG 1628 Query 319519 GAAACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGA 319578 | ||||| ||| || ||||||| || | | |||| | ||||| || || Sbjct 1629 GTGGTCTCCTTGAGGCTGTTCAGGTAGTCGGTGATCCACTTGACGTTGATAACGTCCAGG 1688 Query 319579 TGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGA 319638 ||||| || |||||||| || ||||| | | || || | |||| ||||| ||||| Sbjct 1689 TGGTTCGTAGGCTCGTCGAGCAGCAGAATGTCAGCCTTGAACAGCACGGCACGCGCAAGG 1748 Query 319639 GCGAGTTTCATTTTCCACCCTCCGGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATA 319698 ||||| ||||| ||||| || || || || | | || || | | ||||||| Sbjct 1749 GCGAGCTTCATCTTCCAACCACCCGAGAGCGCCGTGATGGGACCGGCCTGGCGCTGCTCG 1808 Query 319699 TCAAAGCCAACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTT 319758 || ||||| | | | || ||| || |||| | | | || || | | || Sbjct 1809 TCGAAGCCCATC--TCCTTGAG------CG-TCTTGGCG-GCGGCCTCGTGGTCGACGTT 1858 Query 319759 A-----CTTGTTCATCATTGGCAATGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGT 319813 ||||| || |||||||||| ||||| | ||| | || || |||| Sbjct 1859 GAGACGCTTGTCGGCCA----CAATGAAGTCGATGATCGAGATGTCACCCTCCGAGCCGT 1914 Query 319814 CGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCT 319873 |||| ||||| || ||||| || | | || | || ||||| || || | || Sbjct 1915 CGAGGTCGTGCTCGACGTACCAGGTGCGGACCTCCTCGGGGGACGGGAAGCCCTCGACCT 1974 Query 319874 GGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGAC 319933 |||||||| || ||||||||||| || || ||||||| ||||| | ||||| |||| Sbjct 1975 GGCCGTTCTGGATGGCGCGCATCAGCGTCGACTTACCCGAACCGTTGCGGCCACAGAGAC 2034 Query 319934 CGTAGCGGTTTCCGCGTTT------CAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTC 319987 ||||||||| || || || |||| || ||| ||||||| ||||| || Sbjct 2035 CGTAGCGGTGGCCACGCTTGAGACGCAGGGTG-GCCG-----TGTTCAGCAGAATCTTGG 2088 Query 319988 CACCATATGCCAGAGAAAATTCACAATCACACAGATC 320024 |||| || || || || || | || | |||||| || Sbjct 2089 CACCGTAGGCGAGCGAGAACTGGCAGTTACACAGGTC 2125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057800837290670