Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1121 493 1e-134 seq1389 149 6e-31 seq1105 129 6e-25 seq1156 116 4e-21 >seq1121 Length=2436 Score = 493 bits (546), Expect = 1e-134 Identities = 626/850 (74%), Gaps = 11/850 (1%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||| || |||||| |||||| || ||| | |||||||| | |||| || Sbjct 1079 GAGCCGCTCCTCATTGAGAACAACCGCCGCTTTGTGCTGTTCCCCATCCGCTACCACGAG 1020 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| |||||||| |||||||||| |||||| | |||||| Sbjct 1019 ATCTGGCAGATGTACAAGAAGGCGGAGGCGTCCTTCTGGACCGCCGAGGAAATTGACCTG 960 Query 116696 TCCAAGGACACGAGCGACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| | ||||||||| | || ||| ||||| |||||||| || |||| Sbjct 959 TCCAAGGACCTGCACGACTGGGACCACCGCCTGACGGACAATGAGCGCCACTTTATCAGC 900 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG- 116811 ||||| || || || || || || ||||| ||||| |||||||| ||||||||||| Sbjct 899 CACGTCCTTGCGTTCTTTGCGGCGTCGGACGGTATCGTGAACGAGAACCTGGTCGAGCGC 840 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | ||||||||| ||||||||||| ||||||||||| || |||||| || Sbjct 839 TTTAGCGCCG-AGGTGCAGGCCGCCGAGGCGCGCTGCTTCTACGGTTTCCAGATCATGAT 781 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 |||||| | |||||||| | || ||| ||| |||||||||||| | ||| | || Sbjct 780 TGAGAACATCCACTCGGAGACCTACTCGCTCCTTATCGACACGTACATCCGCGAGCCCGA 721 Query 116932 GGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGA 116991 | || | |||||| || ||||||||||| || ||| || || | |||||||| Sbjct 720 GCAGCGCGACTTTTTGTTCAATGCCATCGAGACCATCCCGGTGGTGAAGCAAAAGGCCGA 661 Query 116992 GTGGGCGCTGCGCTGGATCGCCGGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGGCCT 117050 ||||||||||||||||||| || || || | ||| | ||| ||||| || ||||| | Sbjct 660 GTGGGCGCTGCGCTGGATCAGCGACA-AGCGCGCCTCGTTCTCGGAGCGTCTTGTGGCGT 602 Query 117051 TCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGA 117110 | || ||||| |||||| ||||||| |||||| || || |||| |||||||| |||| Sbjct 601 TTGCCGCCGTTGAGGGCATCTTCTTCTCGGGCTCGTTTGCGTCCATCTTTTGGCTGAAGA 542 Query 117111 AACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTC 117170 | |||||||| |||||||||||| ||||| ||||||||||| ||| | |||||||| | Sbjct 541 AGCGCGGCCTGATGCCCGGCCTGTCTTTCTCGAACGAGCTCATTTCCCGCGACGAGGGCC 482 Query 117171 TGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCG-AGCGCGGCG 117229 |||| ||||||||| || |||| || | || || | |||| || | | || | Sbjct 481 TGCACACCGACTTTGCGTGCCTGCTCTTTAGCCACCTGAAGAAGCGCGCGCACCCCGACA 422 Query 117230 CGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCG 117289 || || | |||| | ||||| || ||| | ||||||||| ||| | |||| ||| Sbjct 421 CG-GTGAACCGGATCATTACCGAGGCCGTCTCGATCGAGCAGGACTTTTTGTCCGACGCG 363 Query 117290 CTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGT 117348 ||||| ||| ||| | || | || ||| | ||||| || ||||| ||||| || Sbjct 362 CTGCCCGTGTCGCTGATTGGCATGAA-CGCGCGCCTGATGTGCCAGTACATTGAGTTTGT 304 Query 117349 CGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCT 117408 || ||| | ||||| | | ||| | | | | |||||||||||| | | ||||| | Sbjct 303 TGCGGACCGCCTGCTTGTGGCGCTCGGCAACCCGAAGCACTACAACGCCACGAACCCCTT 244 Query 117409 GGACTTTATG 117418 ||||||||| Sbjct 243 CGACTTTATG 234 >seq1389 Length=28264 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || |||||||| || || || ||| |||| ||||| || | Sbjct 4530 ATGCAAGTGTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTCGAGGTCGAGTCCTCG 4471 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || || | ||||| |||||||| || ||||||| Sbjct 4470 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 4411 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || ||||| || |||| || ||||||| |||||||||| Sbjct 4410 CAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGTACCCTCAGCGACTACAAC 4351 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | |||||||| || ||| | ||| || | || || Sbjct 4350 ATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGTGGTGG 4304 >seq1105 Length=2600 Score = 129 bits (142), Expect = 6e-25 Identities = 110/136 (81%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||||||||| |||||||||| || ||||||| || ||||| ||||| || Sbjct 1884 GACAAGGAGGGCATCCCGCCGGACCAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAG 1825 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| ||||| || | |||||||||||||||||||||| | |||||||| || ||| | Sbjct 1824 GACGGACGCACGCTGAGCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTCGTGCTC 1765 Query 40903 CGCTTGAGGGGCGGCG 40918 || || | ||||||| Sbjct 1764 CGGCTGCGTGGCGGCG 1749 >seq1156 Length=36076 Score = 116 bits (128), Expect = 4e-21 Identities = 155/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||| | || || ||||| ||||| || ||||| | || ||||| | | | Sbjct 1576 ATGCAAATCTTCATCAAGACTCTCACTGGCAAGACGATCACTCTGGAGGTCGAGTCGAGC 1635 Query 40750 GACAGCGTGCAAACGCTC--AAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| || | | || | ||| || | | ||||| |||||||| || |||||| Sbjct 1636 GACA-CGATCGA-CGTTGTGAAGTCGAAGGTGCAGGACAAGGAGGGCATTCCTCCGGACC 1693 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || | |||| ||| ||||| ||||| || || | ||||| || | |||||||| Sbjct 1694 AGCAGCGGTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTGAGCGACTACA 1753 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||||| |||||| || || ||| Sbjct 1754 ACATCCAGAAGGAGAGCACGCTCCACCTTGTG 1785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515208193629840