Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1389 123 2e-23 seq1156 105 6e-18 seq1105 95.1 1e-14 >seq1389 Length=28264 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| ||||| | || || ||||| Sbjct 4321 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCCTC 4380 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || |||||| |||| || ||||| || || ||||| |||||||||||||| Sbjct 4381 GAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 4440 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||||| | ||||||||||| ||| | ||| || Sbjct 4441 GATCTTGGCCTTCACATTCTCGATGGTGTCCGAGGACTCGACCTCGAGGGTAATCGTCTT 4500 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 118741 || || || || || || || | |||||||| Sbjct 4501 ACCCGTGAGGGTCTTGACGAACACTTGCATGGC 4533 >seq1156 Length=36076 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||||| || ||| || || |||||||| ||||||| ||||| |||||| Sbjct 1785 CACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTC 1726 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||| | |||||||| || ||||| |||||||||||||| Sbjct 1725 GAGCTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTG 1666 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 | || || || |||| ||||| | ||||||||| | || | ||| || Sbjct 1665 CACCTTCGACTTCACAACGTCGATCGTGTCGCTCGACTCGACCTCCAGAGTGATCGTCTT 1606 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 118741 ||| || ||||| || | || || |||||||| Sbjct 1605 GCCAGTGAGAGTCTTGATGAAGATTTGCATGGC 1573 >seq1105 Length=2600 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| ||||||| ||||| ||||| Sbjct 1768 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGTCCGTCCTC 1827 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 |||||| || || || ||||||| |||||||| || || || |||||||||||||| Sbjct 1828 GAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 1884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433821363990628