Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1156 102 9e-17 seq1389 86.0 7e-12 >seq1156 Length=36076 Score = 102 bits (112), Expect = 9e-17 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| || || ||||| || ||| || || | || || |||||||| || Sbjct 1772 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCGAGCTGCTTGCCG 1713 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT- 43105 ||||| || | ||||||||||| | || | || |||||||||| | || || Sbjct 1712 GCGAAGATCAACCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGCACCTTCGACTTC 1653 Query 43106 -GAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCG 43164 | ||||| | |||||||||||| || || || | ||||| || ||||| || || | Sbjct 1652 ACAACGTCG--ATCGTGTCGCTCGACTCGACCTCCAGAGTGATCGTCTTGCCAGTGAGAG 1595 Query 43165 TCTTTACAAAGATTTGCAT 43183 |||| | ||||||||||| Sbjct 1594 TCTTGATGAAGATTTGCAT 1576 >seq1389 Length=28264 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || |||| || ||||||||||||||||| Sbjct 4339 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCCTCGAGCTGCTTACCAGCGAA 4398 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||| ||||| | || | || |||||||||| ||| || || | | Sbjct 4399 GATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 4458 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| || || || |||| || || || || ||||| || ||||| || Sbjct 4459 CTCGATGGTGTCCGAGGACTCGACCTCGAGGGTAATCGTCTTACCCGTGAGGGTCTTGAC 4518 Query 43172 AAAGATTTGCAT 43183 || | |||||| Sbjct 4519 GAACACTTGCAT 4530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571805384546520