Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1156 127 1e-24 seq1105 95.1 8e-15 >seq1156 Length=36076 Score = 127 bits (140), Expect = 1e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||| | || || || ||||| |||||||||||| |||| ||| | || Sbjct 1787 AGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCC 1728 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || | |||||||||||| || | || ||||||||| Sbjct 1727 TCGAGCTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 1668 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 | ||| ||| | | || | |||| ||| |||| ||||| |||| ||||| || Sbjct 1667 TGCACCTTCGACTTCACAACGTCGATCGTGTCGCTCGACTCGACCTCCAGAGTGATCGTC 1608 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGC 34392 ||||| |||||||| || | ||||| ||||| || Sbjct 1607 TTGCCAGTGAGAGTCTTGATGAAGATTTGCATGGC 1573 >seq1105 Length=2600 Score = 95.1 bits (104), Expect = 8e-15 Identities = 114/151 (75%), Gaps = 3/151 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| ||||||| ||||| ||||| | || || ||||| |||||||||||| | Sbjct 1751 CCGCCACGCAGCCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 1810 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281 ||| || |||| || | ||||||||| || || ||||| |||||||||| || |||| Sbjct 1811 AGCGTGCGTCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGCGGG 1870 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT 34312 | || ||||||||| ||| |||||||| Sbjct 1871 -ATGCCCTCCTTGTCCTGGATC-TTTGCTTT 1899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323065270915040