Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq842 217 3e-51 seq1097 113 1e-19 >seq842 Length=8649 Score = 217 bits (240), Expect = 3e-51 Identities = 787/1207 (65%), Gaps = 47/1207 (4%) Strand=Plus/Plus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892 ||||| ||||| ||| ||||| || || || | |||||| ||| ||| || Sbjct 6698 TTCAAGACGCTCGAGCGCTCGTACCTGCTGCGCATCAACGGCAAGGTCGCGGAGCGCCCG 6757 Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952 ||||||||| | ||||| ||||| ||||| || ||| | || | ||||||| | | Sbjct 6758 CAGCACATGCTCATGCGTGTGGCGGTCGGCATCCACGGCGCGGATGTCGAGAGCGCGATT 6817 Query 248953 GAGACGTACACCGGAATGA--GTGAACGCTGGATGACACATGCCACACCGACGCTCTTCA 249010 |||||||||| | ||| | ||| || | | || |||||| | ||||||||||||| Sbjct 6818 GAGACGTACAACATGATGTCCGAGAAGGC--GTTTACGCATGCCTCGCCGACGCTCTTCA 6875 Query 249011 ACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACT 249070 | ||||| || | | ||| || |||||||| || | |||| | ||||||| Sbjct 6876 ATGCCGGCACGCCGAGCCCGCAGATGTCGTCGTGCTTCCTGGTGTGCATGAAGGACGACT 6935 Query 249071 CTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAATTCGCGGGCG 249130 | |||| ||||| || |||||||| || | |||| |||||| || |||||||| Sbjct 6936 CGATCGAGGGCATCTACGACACGCTCAAGTCGTGTGCGATGATTTCCAAGACCGCGGGCG 6995 Query 249131 GAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATG 249190 | ||||| ||| | || | |||||| | | || |||||||| || || || | Sbjct 6996 GTATCGGCCTCAACATCCACTGCATCCGCGGCACCGGCTCGTACATTGCGGGCACGAACG 7055 Query 249191 GGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCA 249250 | || || | || || || ||| | || || | | ||| || | | | || Sbjct 7056 GCGTGAGCAACGGCATTGTGCCCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTCG 7115 Query 249251 ACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACG 249304 |||||| ||| ||||| || |||| ||||| || | || ||||||| Sbjct 7116 ACCAGGGCGGCAACAAGCGCC---CCGGCGCGTTTGCCATCTACCTCGAGCCGTGGCACT 7172 Query 249305 CCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGC 249364 | || | || |||||| | ||| || |||||| ||||||| ||| || | |||| Sbjct 7173 CGGACGTGTTTGAGTTCATCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGTGCGC 7232 Query 249365 GTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACG 249424 | |||||||| |||| || ||||| ||||| ||||||||||||||||| || | || Sbjct 7233 GCGACCTCTTTTACGCGCTCTGGGTGCCCGACCTGTTCATGCGCCGCGTCGAGCAGGGCG 7292 Query 249425 GCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCATCGATCTAC-ACGGCGCC 249483 ||| |||||||| | | || |||| || || | |||| || || | |||||| Sbjct 7293 CCGACTGGACGCTGATGTGCCCCGCCGAGGCGCCCGGCCTC-GCGGACTGCTACGGCGAG 7351 Query 249484 GACTTCGACCAAGCCTATAAGAAATACGAATCCAACGGCATCGGCAAG---ACAATCAAG 249540 || || ||| | ||| || ||||| | | ||| ||||||| || ||||| Sbjct 7352 GAGTTTGACGAGCTCTACGAGCGCTACGAGCGCGAGGGCCGCGGCAAGCGCACCGTCAAG 7411 Query 249541 GCTCGGACCCT-TTTTGCGAAGGTGGTGGAGTCCCAGATAGAGACAGGGGGGCCGTATTA 249599 || | || || | | || | | | ||| | ||||| ||||| ||| ||||| | | Sbjct 7412 GCACAGAAGCTCTGGTACG-CGATCCTCGAGGCGCAGATCGAGACCGGGACGCCGT-TCA 7469 Query 249600 T-TTGTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGGCATCTTGG---TACCATCC 249655 | | | ||| ||||| ||| |||||| ||||| | || | || | || Sbjct 7470 TGCTCTACAAGGACGCCGCGAACCGCAAGAGCAACCAGAAGAATGTCGGCGTGATCAAGA 7529 Query 249656 GCTCGTCAAATCTCTGTGCAGAGGTGATTCAATACTCGTCCAAGGAGGAGATTGCCGTCT 249715 ||||| || || || | ||| | || | ||| ||| |||||||| ||||| | Sbjct 7530 GCTCG---AACCTGTGCACGGAGATTATGGAGTACAGCTCCCCGGAGGAGACGGCCGTGT 7586 Query 249716 GCAACCTGGCAAGCATCAATCTCGTGAGGCACGT-GAGGGC-------GGAC-AGGACGT 249766 ||||||| || ||| ||| || | | |||||| ||| | ||||| Sbjct 7587 GCAACCTCGCCTCGATCGCGCTCCCGACGTTTATCGAGGGCACCGGCGCGACGAAGACGT 7646 Query 249767 TCGACTTCGAGCGTCTTCACCGGACGGCGAAACAGGCGATCAAAAACCTCAACAAGGTGA 249826 | ||||| |||| || ||| ||| || || | | ||| ||||| ||| | | Sbjct 7647 ACAACTTCCAGCGCCTGCACGAGACCGCCAAGGTCGTGTGCAAGAACCTGAACCGCATCA 7706 Query 249827 TTGATGTCAATTTTTACCCCCTTGAGGAATGCAGGTTG-TCCAACATGAAGCACCGTCCA 249885 | || |||| | |||||| | |||| || | | ||||||||| ||||| || Sbjct 7707 TCGACATCAACTACTACCCCGTGGAGG-CCGCGCGCCGCTCCAACATGCGCCACCGCCCG 7765 Query 249886 TGTGGGCTGGGCGTTCAGGCACTGCACGACGTCTACATGGTGATGGGATTCCCCTTCGAG 249945 || | ||||| |||| ||| |||| | |||| | ||||| | |||||| || Sbjct 7766 ATCGGCATCGGCGTCCAGGGCCTGGCGGACGCGTTCATGATCATGGGCTACCCCTTTGA- 7824 Query 249946 TCAG--AGGAGGCAGCGACG-CTAAATAAACAGATTTTCGAGACCATCTATCACG-GGAG 250001 ||| ||||||| ||| || || || ||||| || ||||| ||||| |||| || | Sbjct 7825 -CAGCCAGGAGGC-GCGCCGCCTCAACCTGCAGATCTTTGAGACGATCTACCACGCGGCG 7882 Query 250002 CGTCGAG 250008 | ||||| Sbjct 7883 C-TCGAG 7888 Score = 84.2 bits (92), Expect = 5e-11 Identities = 177/264 (67%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 248437 GACGGGCGCAAAGAAAACGTTCTCTTCGACAAAATCTCGGCGCGCATCAAGAAGCTCTGT 248496 ||||| ||||| || | || | ||||||||| || |||| || | |||||| || Sbjct 6230 GACGGACGCAAGGAGGAGGTCCGCTTCGACAAGGTCACGGCCCGTGTGGCGAAGCTGTGC 6289 Query 248497 TATGGTCTGGAACCCAACTTCGTCGATCATGTGGCCATCGCCCAGAAAGTTATTTCGGGC 248556 || || || || |||| ||||| | | | ||| | | || || ||| || Sbjct 6290 TACGGCCTCGACATGAACTATGTCGACCCCATCGAGATCACGCGCAAGGTGATTGATGGT 6349 Query 248557 GTCTACACCGGAGTAACAACGACAGAACTGGACACCTTAGCTGCGGAGACGGCGGCGTAC 248616 ||||| || || || || || ||||||| | | || || ||||||||||||||| Sbjct 6350 ATCTACGAGGGCGTTACCACCGTGGAGCTGGACAACCTCGCGGCAGAGACGGCGGCGTAC 6409 Query 248617 ATGGCGATTGCACACCCCGACTACTCGCTGCTGGCCGGGAGGATCGCCGTCTCAAGGCTT 248676 | | ||| | ||||||||||| || |||| |||| | | |||||| || | || Sbjct 6410 AAGACGACGACGCACCCCGACTATGCGGTGCTCGCCGCGCGCATCGCCATCAGCAACCTG 6469 Query 248677 CACAAAGAAACGAAAGAGTCGTTC 248700 ||||| || || || || ||||| Sbjct 6470 CACAAGGAGACAAAGAAGACGTTC 6493 >seq1097 Length=2642 Score = 113 bits (124), Expect = 1e-19 Identities = 189/266 (71%), Gaps = 8/266 (3%) Strand=Plus/Plus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || ||||| || || |||||||| || ||| ||||||| || || Sbjct 562 TGCTCTTCTACGGACCGCCCGGCACCGGTAAGACGTCGACGATCATGGCGCTCGCGCGCC 621 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 |||| ||| || | || || | | ||| || ||||||||||| || ||||| | Sbjct 622 GGCTGTACGGCAAGCAGTTCAAGA---ACCACGTCCTAGAGCTGAACGCGTCCGACGACC 678 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCGATTTCGTCGT 254190 |||| | ||||||||||||| |||||||| | ||| |||| || ||| || Sbjct 679 GCGGCATCGACGTCGTCCGCGGGCAGATCAAGTCGTTC-GCAAGCACGCG-CAACGT-GT 735 Query 254191 TC-CAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACG 254249 || || | || | || | |||||||| | |||| |||||||||||| |||||||| Sbjct 736 TCAGCACGCAGCCGGACG-CATTCAAGCTGATCGTCCTCGACGAGGCGGACGCCATGACG 794 Query 254250 GCCGACGCGCAGTCCGCCCTCCGCCG 254275 | ||| ||| | || |||||||| Sbjct 795 CAGGCCGCCCAGGCTGCGCTCCGCCG 820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073742888206912