Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1156 140 3e-28 seq1389 122 7e-23 seq1105 86.0 5e-12 >seq1156 Length=36076 Score = 140 bits (154), Expect = 3e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||||||||||||||| |||||||||||| |||| ||| | || || || || Sbjct 1779 GTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCGAGCTG 1720 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| ||||||||||| ||||| ||||| | |||||||||||| | || Sbjct 1719 CTTGCCGGCGAAGATCAACCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGCACCTT 1660 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||| ||||||| || ||||||||||| || Sbjct 1659 CGACTTCACAACGTCGATCGTGTCGCTCGACTCGACCTCCAGAGTGATCGTCTTGCCAGT 1600 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 |||||||| | |||||||||||| Sbjct 1599 GAGAGTCTTGATGAAGATTTGCATG 1575 >seq1389 Length=28264 Score = 122 bits (134), Expect = 7e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||||||||| ||||||||| |||||||||||| | || || |||| || || || Sbjct 4327 GTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCCTCGAGCTG 4386 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| |||| ||||||||||| ||||| | |||||||||||| || || Sbjct 4387 CTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 4446 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | | ||||| ||| ||||| | |||||||||||| ||||| Sbjct 4447 GGCCTTCACATTCTCGATGGTGTCCGAGGACTCGACCTCGAGGGTAATCGTCTTACCCGT 4506 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || || | ||||||| Sbjct 4507 GAGGGTCTTGACGAACACTTGCATG 4531 >seq1105 Length=2600 Score = 86.0 bits (94), Expect = 5e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||||||||| ||||||||| |||||||||||| |||| ||| |||| || || || Sbjct 1774 GTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGTCCGTCCTCGAGCTG 1833 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || ||||| || || | ||||| ||||| || || | |||||||||||| Sbjct 1834 CTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 1885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395066971200889