Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1121 134 1e-26 >seq1121 Length=2436 Score = 134 bits (148), Expect = 1e-26 Identities = 305/449 (68%), Gaps = 15/449 (3%) Strand=Plus/Minus Query 50413 GAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCC 50472 || ||| | |||||||||||| ||||| || | || || || || ||||| || Sbjct 617 GAGCGTCTTGTGGCGTTTGCCGCCGTTGAGGGCATCTTCTTCTCGGGCTCGTTTGCGTCC 558 Query 50473 ATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATT 50532 || |||| | || | ||| | ||||||||||| | || |||||| | ||| Sbjct 557 ATCTTTTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGTCTTTCTCGAACGAGCTCATT 498 Query 50533 TCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTAAAT 50592 || |||||||| || ||||||| ||||||||||| || || || | | | || Sbjct 497 TCCCGCGACGAGGGCCTGCACACCGACTTTGCGTGCCTGCTCTT---TAGCCACCTGAA- 442 Query 50593 GAAAAATTATCATAC-GAAACAATTTTGGACATGTTCAAA---GAAGCCGTCGACATCGA 50648 ||| || | || || | | || | ||| || |||||| ||||| Sbjct 441 GAAGCGCGCGCACCCCGACACGGT---GAACCGGATCATTACCGAGGCCGTCTCGATCGA 385 Query 50649 AAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGAT 50708 | || ||||| | ||||| | |||||| | || | ||||||||||| | |||| Sbjct 384 GCAGGACTTTTTGTCCGACGCGCTGCCCGTGTCGCTGATTGGCATGAACGCGCGCCTGAT 325 Query 50709 GTGCGAGTACATTGAGTTTGTTGCAGACAGATTG-TTGTTGCAGCTGGGACAACCGAAAT 50767 |||| ||||||||||||||||||| ||| | || |||| || ||| || | ||||| Sbjct 324 GTGCCAGTACATTGAGTTTGTTGCGGACCGCCTGCTTGTGGC-GCTCGGCAACCCGAAGC 266 Query 50768 ACTATAATGC-ACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACA 50826 |||| || || ||| |||||||| |||||| | ||||| ||| || ||||||| | Sbjct 265 ACTACAACGCCACG-AACCCCTTCGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCG 207 Query 50827 AACTTTTTCGAAAGACGTGTAGGCGAATA 50855 ||||||||||| | || || ||||| || Sbjct 206 AACTTTTTCGAGCGCCGCGTCGGCGACTA 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507003568904880