Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1121 280 2e-70 seq842 251 1e-61 >seq1121 Length=2436 Score = 280 bits (310), Expect = 2e-70 Identities = 593/872 (68%), Gaps = 37/872 (4%) Strand=Plus/Minus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| |||||| | || || || || ||| | |||||||| ||||| |||| ||||| Sbjct 1043 CTGTTCCCCATCCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCGGAGGCGTCCTTC 984 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 ||||| | ||| || | || ||||||||||||||| |||| ||||| || |||| Sbjct 983 TGGACCGCCGAGGAAATTGACCTGTCCAAGGACCTGCACGACTGGGACCACCGCCTGACG 924 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 || | |||||| | ||||| ||| | | || |||||||| | || || || ||| Sbjct 923 GACAATGAGCGCCACTTTATCAGCCACGTCCTTGCGTTCTTTGCGGCGTCGGACGGTATC 864 Query 125175 GTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCGT 125232 || ||||| || ||| | || || ||| || || || |||| | | Sbjct 863 GTGAACGAGAACCTGGTCGAGCGCTTTAGCGCCGAGGTG--CAGGCCGCCGAGGCGCGCT 806 Query 125233 GCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 |||| ||||| ||||| ||||||||||||||| | |||||||| | ||||| || | Sbjct 805 GCTTCTACGGTTTCCAGATCATGATTGAGAACATCCACTCGGAGACCTACTCGCTCCTTA 746 Query 125293 TTGACATGTACATTCGCGATCC---GCAACGTAAACACATGCTCTTTAACGCAATCGACA 125349 | |||| |||||| ||||| || ||| || || | | || || || ||||| | Sbjct 745 TCGACACGTACATCCGCGAGCCCGAGCAGCG---CGACTTTTTGTTCAATGCCATCGAGA 689 Query 125350 CGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAG- 125408 | | ||| | ||||||| | |||| | | || |||||| ||||||| Sbjct 688 CCATCCCGGTGGTGAAGCAAAAGGCCGAGTGGGCGCTGCGCTGGATC---AGCGACAAGC 632 Query 125409 --TCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGG 125466 | |||| | | || | || ||||| || |||||||| |||||||||||||| |||| Sbjct 631 GCGCCTCGTTCTCGGAGCGTCTTGTGGCGTTTGCCGCCGTTGAGGGCATCTTCTTCTCGG 572 Query 125467 GTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACA 125526 | |||||| ||||||||||||| ||||||||||| || |||||||| ||| | | Sbjct 571 GCTCGTTTGCGTCCATCTTTTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGTCTTTCT 512 Query 125527 GTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTC 125586 |||||| | || || || ||||||||||| ||| |||||||| || || ||| Sbjct 511 CGAACGAGCTCATTTCCCGCGACGAGGGCCTGCACACCGACTTTGCGTGCCTGCTCTTTA 452 Query 125587 GCAACTATCTG-CGTCCCGAGTGCAGATCCA-GCGATGAAAAGGTCATCAACATTGTAAC 125644 || || ||| | || | ||| | | || |||| || |||| | || Sbjct 451 GCCAC---CTGAAGAAGCGCGCGCACCCCGACACGGTGAACCGG--ATCA------TTAC 403 Query 125645 CGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGG 125704 ||| ||||| ||| || || || ||| | |||| | || || || ||||||| Sbjct 402 CGAGGCCGTCTCGATCGAGCAGGACTTTTTGTCCGACGCGCTGCCCGTGTCGCTGATTGG 343 Query 125705 CATGAACTGCAAG-CTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACG 125763 ||||||| || | || |||||| ||||||| |||||||| || || || || || | Sbjct 342 CATGAAC-GCGCGCCTGATGTGCCAGTACATTGAGTTTGTTGCGGACCGCCTGCT---TG 287 Query 125764 AGTTGATTGG---CCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCA 125820 | | | || || ||| |||||||||| ||| ||||| || || ||| | || Sbjct 286 TGGCGCTCGGCAACCCGAAGCACTACAACGCCACGAACCCCTTCGACTTTATGGAGAACA 227 Query 125821 TATCACTAGAGGGTAAGACCAACTTTTTCGAG 125852 | || || |||| ||| | |||||||||||| Sbjct 226 TTTCGCTGCAGGGCAAGTCGAACTTTTTCGAG 195 >seq842 Length=8649 Score = 251 bits (278), Expect = 1e-61 Identities = 394/561 (70%), Gaps = 2/561 (0%) Strand=Plus/Plus Query 96825 GGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGGC 96884 ||| | ||||| |||||| | ||||||| | | | || ||||| ||||||||| Sbjct 7067 GGCATTGTGCCCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTCGACCAGGGCGGC 7126 Query 96885 AATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGAC 96944 || || || || ||||| | ||| ||||| | || || |||||| ||||||| ||||| Sbjct 7127 AACAAGCGCCCCGGCGCGTTTGCCATCTACCTCGAGCCGTGGCACTCGGACGTGTTTGAG 7186 Query 96945 TTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTAT 97004 || ||||| ||||||| ||| ||| || |||| || || | ||| | ||||| Sbjct 7187 TTCATCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGTGCGCGCGACCTCTTTTAC 7246 Query 97005 GCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTA 97064 || ||||||||||| || |||||||| |||||| | | || | | |||||| || Sbjct 7247 GCGCTCTGGGTGCCCGACCTGTTCATGCGCCGCGTCGAGCAGGGCGCCGACTGGACGCTG 7306 Query 97065 ATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAG 97124 |||||||||| | | | ||||| || | || |||| ||||| |||||||| | Sbjct 7307 ATGTGCCCCGCCGAGGCGCCCGGCCTCGCGGACTGCTACGGCGAGGAGTTTGACGAGCTC 7366 Query 97125 TACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACGAGAA-CTGTG 97183 ||| | |||||||| |||||||| | | | ||| | |||| |||| || || Sbjct 7367 TACGAGCGCTACGAGCGCGAGGGCCGCGGCAAGCGCACCGTCAAGGCAC-AGAAGCTCTG 7425 Query 97184 GAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATAC 97243 | | || ||| | ||| ||| | ||||| || || |||| ||| ||||||||||| | Sbjct 7426 GTACGCGATCCTCGAGGCGCAGATCGAGACCGGGACGCCGTTCATGCTCTACAAGGACGC 7485 Query 97244 CGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCAC 97303 || ||| ||||| |||||||| | | ||| |||||| |||| || |||||||| Sbjct 7486 CGCGAACCGCAAGAGCAACCAGAAGAATGTCGGCGTGATCAAGAGCTCGAACCTGTGCAC 7545 Query 97304 GGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAA 97363 ||| ||| | |||||| ||| ||||| |||||||| || ||| || || ||| || Sbjct 7546 GGAGATTATGGAGTACAGCTCCCCGGAGGAGACGGCCGTGTGCAACCTCGCCTCGATCGC 7605 Query 97364 TCTGCCCAAGTTTGTAGAGGG 97384 || || | |||| | ||||| Sbjct 7606 GCTCCCGACGTTTATCGAGGG 7626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741043369122840