Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1121 168 1e-36 seq775 100 6e-16 seq918 84.2 4e-11 >seq1121 Length=2436 Score = 168 bits (186), Expect = 1e-36 Identities = 558/843 (66%), Gaps = 41/843 (5%) Strand=Plus/Plus Query 251554 ACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAG 251613 || ||||| ||||| || || |||||||||| ||| || || |||||| ||||||||| Sbjct 187 ACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCATAAAGTCGAAG 246 Query 251614 GGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACA 251673 ||||| ||||| ||||| ||||| || | ||| || || || | | |||||| || ||| Sbjct 247 GGGTTCGTGGCGTTGTAGTGCTTCGGGTTGCCGAGCGCCACAAGCAGGCGGTCCGCAACA 306 Query 251674 AACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGC 251732 ||||| | ||||| | |||||| | |||||||||||||| ||||| || | || Sbjct 307 AACTCAATGTACTGGCACATCAGGCGCGCGTTCATGCCAATCA-GCGACACGGGCAGCGC 365 Query 251733 CTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGC 251792 || | | || |||| ||| | | || ||||| | || |||||| ||| Sbjct 366 GTCGGACAAAAAGTCCTGCTCGATCGAGACGGCCTCGGTAATGATCCGGTTCACC-GTGT 424 Query 251793 CAGAGACAGCTTG-TTCTCCAGCT---TTGAGTACAGGAGCTCGCCAAACTGTTGGTGCA 251848 | | | || | |||| ||| | | || ||| || || |||| | ||||| Sbjct 425 CGGGGTGCGCGCGCTTCTTCAGGTGGCTAAAGAGCAG--GCACG-CAAAGTCGGTGTGCA 481 Query 251849 GACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGT 251908 | ||||||||||| |||| |||||| || | | |||||| ||||||| || || | Sbjct 482 GGCCCTCGTCGCGGGAAATGAGCTCGTTCGAGAAAGACAGGCCGGGCATCAGGCCGCGCT 541 Query 251909 TCCTGAGCCAGAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACC 251967 || | ||||| ||||| | ||| ||| || || ||||| | | ||||| || | Sbjct 542 TCTTCAGCCAAAAGATGGACGC-AAACGAGCCCGAGAAGAAGATGCCCTCAACGGCGGCA 600 Query 251968 CATGCAACAAGGCGCTCAGCAAACGA------CTTGTC-CTGCGACAAGAACTTCTGTGC 252020 | || ||||| ||||| | ||||| |||||| ||| | | | | || Sbjct 601 AACGCCACAAGACGCTCCGAGAACGAGGCGCGCTTGTCGCTG----ATCCAGCGCAGCGC 656 Query 252021 CCATGCTGCCTTCT--TTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTC 252078 ||| | ||||| | ||| ||| | ||||| || ||||| |||| || | | ||| Sbjct 657 CCACTCGGCCTTTTGCTTC--ACCACCGGGATGGTCTCGATGGCATTGAACAAAAAGT-- 712 Query 252079 CGCTCGGCATCGTCCTC---GATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGG 252135 ||| | || ||| ||| |||| || || | ||||| ||||| ||||||| ||| Sbjct 713 CGCGCTGC-TCGGGCTCGCGGATGTACGTGTCGATAAGGAGCGAGTAGGTCTCCGAGTGG 771 Query 252136 ATGGATTCGTTGAACATCTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGG--TG-ACT 252192 ||| || | | |||||| || | |||| || ||||| || ||| || || Sbjct 772 ATGTTCTCAATCATGATCTGGAAACCGTAGA--AGCAGCGCGCCTCGG-CGGCCTGCACC 828 Query 252193 TCCGTGGAAAAGTTGTTTGCAATGTTCTCCATCACCATGCCAT-CGCTGCCTGCAAAGAA 252251 || | | |||| | | | |||||| |||| || || | || ||| |||||||| Sbjct 829 TCGGCGCTAAAGCGCTCGACCAGGTTCTCGTTCACGATACCGTCCGACGCC-GCAAAGAA 887 Query 252252 GCCAAGAATGGTCTTGATGAAGTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGC 252311 |||| | | |||| ||||| ||||||| ||| | || || ||||||| Sbjct 888 CGCAAGGACGTGGCTGATAAAGTGGCGCTCATTGTCCGTCAGGCGGTGGTCCCAGTCGTG 947 Query 252312 AATGTCCTGATTCAGAGGAACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTA 252371 | ||||| ||| || ||| || | |||||||| | | | ||||||||||||| Sbjct 948 CAGGTCCTTGGACAGGTCAATTTCCTCGGCGGTCCAGAAGGACGCCTCCGCCTTCTTGTA 1007 Query 252372 CAT 252374 ||| Sbjct 1008 CAT 1010 >seq775 Length=13278 Score = 100 bits (110), Expect = 6e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 279351 GATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTACC 279410 || |||||| |||| | ||||||||||| || |||| ||||||||||| ||| | || Sbjct 2125 GACCTGTGTAACTGCCAGTTCTCGCTCGCCTACGGTGCCAAGATTCTGCTGAACACGGCC 2066 Query 279411 CGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAG 279470 ||| ||||||||||| |||| || |||||| || | ||| || |||||||| Sbjct 2065 ACCCTGCGTCTCAAGCGTGGCCACCGCTACGGTCTCTGTGGCCGCAACGGTTCGGGTAAG 2006 Query 279471 AGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCATCTGAG 279530 || || ||||||||||| ||||| ||| | || || || || | | ||| Sbjct 2005 TCGACGCTGATGCGCGCCATCCAGAACGGCCAGGTCGAGGGCTTCCCGTCCCCCGAGGAG 1946 Query 279531 GTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563 || | || ||| || ||||||||| ||||| Sbjct 1945 GTCCGCACCTGGTACGTCGAGCACGACCTCGAC 1913 Score = 87.8 bits (96), Expect = 4e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 280177 TTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGG 280236 |||| ||||| ||| |||||||||| || || | || || | || || || || Sbjct 1302 TTGGCCCCAACGGTTCGGGTAAGTCGACGCTCGTGAAGCTCGTTGTCGGTGACACGGAGC 1243 Query 280237 CCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACG 280296 | | ||||| | |||||||| |||||| || || | |||||||| ||||||| Sbjct 1242 CGAACGAGGGTGAGCTCTGGAAGCACCCCAACCTGGTCATTGGCTACGTCGCCCAGCACG 1183 Query 280297 CTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCT 280356 | |||||||||||||| | |||||||||| ||| || | ||||| | ||||||| Sbjct 1182 CCTTCCACCACATCGACCAGCACCTGGACAAGACGCCCCTGGAGTACATGCTCTGGCGCT 1123 Query 280357 A 280357 | Sbjct 1122 A 1122 >seq918 Length=5674 Score = 84.2 bits (92), Expect = 4e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 280725 TCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTG 280784 || || |||||||||||||| | || ||| || || |||||| | |||| || ||| Sbjct 3915 TCGGGCGGCCAGAAGGTCAAGGTGGTGCTCGCCGCGGCGCTGTGGAACAACCCGCAGGTG 3974 Query 280785 ATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGAG 280823 |||| ||||||||||| |||||||| || ||||||||| Sbjct 3975 CTCGTGCTCGACGAGCCGACCAACTACCTCGACCGCGAG 4013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027814293907269