Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq775 114 3e-20 seq1121 104 5e-17 seq987 87.8 4e-12 >seq775 Length=13278 Score = 114 bits (126), Expect = 3e-20 Identities = 370/571 (65%), Gaps = 19/571 (3%) Strand=Plus/Plus Query 333783 TGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCAC 333842 |||| ||| ||| || || ||| |||||| ||||||||| ||||| || | | Sbjct 1569 TGGAGAATGTCGGTACACACGTCGTTCAGGAACTTGGAGTCGTGCGACACGATGATCGAG 1628 Query 333843 GAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGA 333902 | ||||| ||| || ||||||| || | | |||| | ||||| || || Sbjct 1629 GTGGTCTCCTTGAGGCTGTTCAGGTAGTCGGTGATCCACTTGACGTTGATAACGTCCAGG 1688 Query 333903 TGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGA 333962 ||||| || |||||||| || || || | | || || | |||| ||||| ||||| Sbjct 1689 TGGTTCGTAGGCTCGTCGAGCAGCAGAATGTCAGCCTTGAACAGCACGGCACGCGCAAGG 1748 Query 333963 GCGAGTTTCATTTTCCACCCTCCTGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATA 334022 ||||| ||||| ||||| || || || || | | || || | | ||||||| Sbjct 1749 GCGAGCTTCATCTTCCAACCACCCGAGAGCGCCGTGATGGGACCGGCCTGGCGCTGCTCG 1808 Query 334023 TCAAAGCCAACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTT 334082 || ||||| | | | || ||| || |||| | | | || || | | || Sbjct 1809 TCGAAGCCCATC--TCCTTGAG------CG-TCTTGGCG-GCGGCCTCGTGGTCGACGTT 1858 Query 334083 A-----CTTGTTCATCATTGGCAATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGT 334137 ||||| || |||||||||| ||||| | |||| | || || |||| Sbjct 1859 GAGACGCTTGTCGGCCA----CAATGAAGTCGATGATCGAGATGTCACCCTCCGAGCCGT 1914 Query 334138 CGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCT 334197 |||| ||||| || ||||| || | | || | || ||||| || || | || Sbjct 1915 CGAGGTCGTGCTCGACGTACCAGGTGCGGACCTCCTCGGGGGACGGGAAGCCCTCGACCT 1974 Query 334198 GACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGAC 334257 | |||||| || ||||||||||| || || ||||||| ||||| | ||||| |||| Sbjct 1975 GGCCGTTCTGGATGGCGCGCATCAGCGTCGACTTACCCGAACCGTTGCGGCCACAGAGAC 2034 Query 334258 CGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCAT 334317 ||||||||| |||||||| ||| | | ||||||| ||||| || |||| | Sbjct 2035 CGTAGCGGTGGCCACGCTTGAGACGCAGGGTGGCCGTGTTCAGCAGAATCTTGGCACCGT 2094 Query 334318 ATGCCAGAGAAAATTCACAATCACACAGATC 334348 | || || || || | || | |||||| || Sbjct 2095 AGGCGAGCGAGAACTGGCAGTTACACAGGTC 2125 >seq1121 Length=2436 Score = 104 bits (114), Expect = 5e-17 Identities = 256/378 (68%), Gaps = 19/378 (5%) Strand=Plus/Minus Query 243349 TGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCT--AAC 243405 |||| |||||||||||||| ||| || ||||||| ||||| |||| ||| ||| Sbjct 564 TGCGTCCATCTTTTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCT--GTCTTTCTCGAAC 507 Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCG-GTGAGCTTATGTATTCAAA 243464 ||| |||| |||||||||||||| ||| | || | ||| || | | | | Sbjct 506 GAGCTCATTTCCCGCGACGAGGGCCTGCACACCGACTTTGCGTGC-CTGCTCTTT---AG 451 Query 243465 GCTCCAGAACAAGCT-----ACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTT 243519 | || ||| |||| ||| ||| ||||| || | ||||| || || || || Sbjct 450 CCACCTGAAGAAGCGCGCGCACCC--CGACACGGTGAACCGGATCATTACCGAGGCCGTC 393 Query 243520 GAAAACGAAAAGGAATTCATTTGCGACGCTATTCCA-TGCCGGCTTATTGGCATGAACTC 243578 | ||| |||| || | | |||||| | || || || || |||||||||||| | Sbjct 392 TCGATCGAGCAGGACTTTTTGTCCGACGCGCTGCCCGTGTCG-CTGATTGGCATGAACGC 334 Query 243579 TGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTA 243638 || ||| | |||||||| || || || || |||||| | | | ||||| || | Sbjct 333 GCGCCTGATGTGCCAGTACATTGAGTTTGTTGCGGACCGCCTGCTTGTGGCGCTCGGCAA 274 Query 243639 TGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGG 243698 ||| |||||| ||| ||||||||| | |||||||||| ||||||||| || || Sbjct 273 CCCGAAGCACTACAACGCCACGAACCCCTTCGACTTTATGGAGAACATTTCGCTGCAGGG 214 Query 243699 GAAAACTAACTTCTTCGA 243716 || | ||||| ||||| Sbjct 213 CAAGTCGAACTTTTTCGA 196 >seq987 Length=3890 Score = 87.8 bits (96), Expect = 4e-12 Identities = 197/286 (69%), Gaps = 10/286 (3%) Strand=Plus/Minus Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGG 297496 ||||| ||||| || || ||||| ||||| || ||| | | | ||| || |||||| Sbjct 2656 GTGAAGATATAACGCGCGCTCGCCGCGTCCTTGCCGCCCATCGAGCGCGAGCCAAACTGG 2597 Query 297497 CCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAA-TCCTGTGCAAGGTTCAC 297555 || | ||||| | ||| | ||| ||||| ||| || || || || || ||| || Sbjct 2596 CCGTTCGGCATGAGGAGGTTCACGTTGTTGCTCCCG-CAGAAGTCTTGCGCGAGGCCGAC 2538 Query 297556 GATGGTCCCTTGCAGAGAT--GCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAA 297613 ||| ||| | | |||| || ||||| ||||| || ||| | ||||| || ||||| Sbjct 2537 GATCGTCA--TCCCGAGACTCGCCTCGCCGTGGTGGTACGCGGTGTGCTCCGCGACGTAG 2480 Query 297614 CCGCTGAACTG-TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTG-AATATA 297671 || || ||| |||| |||| | |||||| | | |||||||||| |||| | | | | Sbjct 2479 CCCTGGAGCTGCTGCA-CCTTAATCTCGGTCCTGAGATTGCGCTTG-AAGCAGCCAAAGA 2422 Query 297672 TCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAAT 297717 ||| || || || || || | || || || ||||||||||| Sbjct 2421 GCACCTTGCGCTGCCCGGGCTTCAGGCCGTCGACCACCGACGGAAT 2376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102855850719150