Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1105 96.9 3e-15 seq1156 91.5 1e-13 seq1121 87.8 2e-12 >seq1105 Length=2600 Score = 96.9 bits (106), Expect = 3e-15 Identities = 112/150 (75%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| |||| | ||||| || || | |||||| || || || |||||||| || Sbjct 1751 CCGCCACGCAGCCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 1810 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || ||||||||||||||| | ||||| ||||||||||| || || Sbjct 1811 AGCGTGCGTCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGCGGG 1870 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || || || || || || | | |||||||| Sbjct 1871 ATGCCCTCCTTGTCCTGGA-TCTTTGCTTT 1899 >seq1156 Length=36076 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || || | ||| || || || |||||||| || | ||||| | || Sbjct 1788 AAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATC 1729 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || |||||||||||||| | || | |||||||||||| |||||||| || || || || Sbjct 1728 CTCGAGCTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 1669 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | || ||| ||||| || | || || | | || || || | ||| | || Sbjct 1668 CTGCACCTTCGACTTCACAACGTCGATCGTGTCGCTCGACTCGACCTCCAGAGTGATCGT 1609 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | ||| || | ||| |||||||| Sbjct 1608 CTTGCCAGTGAGAGTCTTGATGAAGATTTGCAT 1576 >seq1121 Length=2436 Score = 87.8 bits (96), Expect = 2e-12 Identities = 124/170 (73%), Gaps = 6/170 (4%) Strand=Plus/Plus Query 132540 TATTCGCCCACTCGACGTTCGAAAAAGTTTGTCTTGCCCTCCAGCGATATGTTGTTCATG 132599 || ||||| || || || ||||||||||| | |||||||| |||||| ||||| | ||| Sbjct 178 TAGTCGCCGACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCATA 237 Query 132600 AAATTAAAAGGATTGGGTGTGTTAAAATG-TTTGGGTTGTTGCAGCTCTGTAAGCAACCG 132658 || | || || || | | ||| | || || |||||| | ||| | ||||| || Sbjct 238 AAGTCGAAGGGGTTCGTGGCGTTGTAGTGCTTCGGGTTGCCG-AGCGCCACAAGCAGGCG 296 Query 132659 ATCCGCCACAAACTCGATATATTCGCACAT--GGCGCGCGAATTCATACC 132706 ||||| |||||||| || || | |||||| |||||||| ||||| || Sbjct 297 GTCCGCAACAAACTCAATGTACTGGCACATCAGGCGCGCG--TTCATGCC 344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499634126337960