Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1156 147 2e-30 seq1105 105 8e-18 seq1389 100 3e-16 >seq1156 Length=36076 Score = 147 bits (162), Expect = 2e-30 Identities = 161/212 (76%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || || | || |||||||| ||||| ||||||||| || ||||| | || || Sbjct 1785 CACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTC 1726 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| ||||| ||||||||||| | || | || |||||||||| Sbjct 1725 GAGCTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTG 1666 Query 46504 GATCTTCTTCTT--GAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTT 46561 | |||| ||| | ||||| | |||||||||||| || || |||| ||||| || Sbjct 1665 CACCTTCGACTTCACAACGTCG--ATCGTGTCGCTCGACTCGACCTCCAGAGTGATCGTC 1608 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || | ||||||||||| Sbjct 1607 TTGCCAGTGAGAGTCTTGATGAAGATTTGCAT 1576 >seq1105 Length=2600 Score = 105 bits (116), Expect = 8e-18 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| ||||||||| || ||||| |||| || Sbjct 1768 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGTCCGTCCTC 1827 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||| || || | |||||||||||| | ||| | || |||||||||| Sbjct 1828 GAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 1887 Query 46504 GATCTT 46509 |||||| Sbjct 1888 GATCTT 1893 >seq1389 Length=28264 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| ||||||||| || || || |||| || Sbjct 4321 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCCTC 4380 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||| || ||||| |||| |||||| ||||| | || | || |||||||||| Sbjct 4381 GAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 4440 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| | || | | ||||| || || || || | || || || || Sbjct 4441 GATCTTGGCCTTCACATTCTCGATGGTGTCCGAGGACTCGACCTCGAGGGTAATCGTCTT 4500 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || | |||||| Sbjct 4501 ACCCGTGAGGGTCTTGACGAACACTTGCAT 4530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565226325094680