Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq906 123 2e-23 >seq906 Length=6026 Score = 123 bits (136), Expect = 2e-23 Identities = 402/630 (64%), Gaps = 37/630 (6%) Strand=Plus/Plus Query 29789 CGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGT 29848 ||||||| || ||||| || | ||| || ||||||||||| || || |||| | | Sbjct 4132 CGAGCTGTTCCTGGAGCGGCTCGATGTGGTCGAGGTAGACGTGCGCATCGCCCATCGCGA 4191 Query 29849 GGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGT 29908 | |||||| ||| || ||| || || || || || | | ||| || || | || Sbjct 4192 GCGTAAACTCGGCCGCCTCGCACCCCGTCACATGCGCGATGAGATGCGTCAGTAGTGCGT 4251 Query 29909 AGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGAC 29968 |||| || ||||| || || || || || |||| || | ||| | ||||| | ||| | Sbjct 4252 AGCTCGCAATGTTGAACGGGACGCCCAGGCCCAGATCGCACGAGCGTTGGTACATCTGGC 4311 Query 29969 ACGAGAGCT----------CTCCGTCGCT-----------------------CACGTAAA 29995 ||||||||| | ||| ||| |||| | | Sbjct 4312 ACGAGAGCTGCGGCTTGCGCCCCGCGGCTTGCTCGTCGGGCGTAGGAAGTGACACGAAGA 4371 Query 29996 ACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGG 30055 |||| |||| | |||||||||| || || ||||| || || ||| || ||||| | Sbjct 4372 ACTGGCACAGGATGTGGCACGGCGGCAGCGCCATCAGCGGCAGGTCCGGCGGATTCCACG 4431 Query 30056 CGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCA 30115 || ||| | ||||| | ||| ||||| || | || ||| | | ||| | Sbjct 4432 CGGACATCAAAATGCGACGGTCCGTCGGGTTCGTCTTAATCTGGTGGATGACGTGCGCGA 4491 Query 30116 GCTGATCCACCCCCATCCCCGAGTAGTC--TGCCCTCATGTCCGTGTACTCTGCTCCGAA 30173 |||||||||| ||| | || |||||||| | || || || ||||| || || || Sbjct 4492 GCTGATCCACGCCCTTGCCGGAGTAGTCCGTATCCGCA--TCGACGTACTGCGCACCAAA 4549 Query 30174 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30233 || | ||||||||| || |||||||| || || || || | | ||| ||| || Sbjct 4550 GTGGCGCCACTGGAAGCCATACACCGGACCAAGATCGCCGGCGCGGCGGTGTCCGAGCCC 4609 Query 30234 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 30293 | ||| | ||| ||||| ||| |||||| |||||||||| | || ||| | Sbjct 4610 GCGCTTCTGCAAGAAGTCGGCGGAGCCGTTGCCGTCCCAGATGTGCACGTTGCGCTCCGC 4669 Query 30294 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTT 30353 ||| | |||| | || ||| || ||||||||| |||||||| | ||| | Sbjct 4670 GAGTGCGTTGGCATCCGTATTTCCTGAGATGAACCACAGGAGCTCCTCGAGCACGCCGCG 4729 Query 30354 CCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 ||||||| | ||| ||||| || || || Sbjct 4730 GAAAAAGACGCGCTTTGTCGTCAGCAGCGG 4759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408609089133857