Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1156 132 4e-26 seq1389 107 2e-18 seq1105 86.0 6e-12 >seq1156 Length=36076 Score = 132 bits (146), Expect = 4e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 35539 CGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACC 35598 ||| |||||||| || |||||||| ||| || || || | || || |||||||| || Sbjct 1773 CGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCGAGCTGCTTGCC 1714 Query 35599 CGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT 35658 || || ||||||||||||||||||| ||||| || |||||||||| | ||| ||| Sbjct 1713 GGCGAAGATCAACCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGCACCTTCGACTT 1654 Query 35659 CAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718 || | | | |||||||||||| || ||||||| |||||||| || || || | ||| Sbjct 1653 CACAACGTCGATCGTGTCGCTCGACTCGACCTCCAGAGTGATCGTCTTGCCAGTGAGAGT 1594 Query 35719 TTTCACAAATATCTGCAT 35736 || | || || ||||| Sbjct 1593 CTTGATGAAGATTTGCAT 1576 >seq1389 Length=28264 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| | ||| || |||| || ||||||||||| || || Sbjct 4339 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCCTCGAGCTGCTTACCAGCGAA 4398 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||| ||||||| ||||| || |||||||||| |||||| ||||| | | Sbjct 4399 GATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 4458 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || ||||| | || ||||| |||||||| | || || || Sbjct 4459 CTCGATGGTGTCCGAGGACTCGACCTCGAGGGTAATCGTCTTACCCGTGAGGGTCTTGAC 4518 Query 35725 AAATATCTGCAT 35736 || | ||||| Sbjct 4519 GAACACTTGCAT 4530 >seq1105 Length=2600 Score = 86.0 bits (94), Expect = 6e-12 Identities = 88/114 (77%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || || || |||| || |||||||| || ||||| Sbjct 1786 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGTCCGTCCTCGAGCTGCTTGCCGGCAAA 1845 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT 35658 || | ||||||||||||| || | || |||||||||| |||| ||||||| Sbjct 1846 GATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATC-TTTGCTT 1898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450783969921720