Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1389 143 6e-29 seq1156 125 2e-23 seq1696 105 2e-17 seq583 84.2 5e-11 >seq1389 Length=28264 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || || || |||| ||||| ||| | || | || || Sbjct 4319 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCC 4378 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || |||||||| || ||||| || |||||||| Sbjct 4379 TCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 4438 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||||||||| |||| || || || | || |||||| Sbjct 4439 TGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAGGACTCGACCTCGAGGGTAATCGTC 4498 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| | || || | |||||||||||| Sbjct 4499 TTACCCGTGAGGGTCTTGACGAACACTTGCAT 4530 >seq1156 Length=36076 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| ||| || || |||| ||||| ||| || || | ||||| Sbjct 1787 AGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCC 1728 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| | || || ||||| || ||||| || |||||||| Sbjct 1727 TCGAGCTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 1668 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || | ||| ||||||| | ||||| ||||| | || || || | ||||||||| Sbjct 1667 TGCACCTTCGACTTCACAACGTCGATCGTGTCGCTCGACTCGACCTCCAGAGTGATCGTC 1608 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| || ||||| | |||||| Sbjct 1607 TTGCCAGTGAGAGTCTTGATGAAGATTTGCAT 1576 >seq1696 Length=860 Score = 105 bits (116), Expect = 2e-17 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 7572 TACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTT 7631 ||| || ||||| || ||||||| |||||| | |||||||| | | | || || || || Sbjct 381 TACAGCACATGCTTTCCTTATGATCTTCTTTATGGTTATGCCAGCTCTAATGGGAGGATT 322 Query 7632 CGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAA 7691 ||||||| || | ||| |||||||||| || |||||||||||| ||| | || || Sbjct 321 TGGAAATTACTTTGCACCTGTAATGATTGGAGCAGTTGATATGGCTTTCCCACGACTAAA 262 Query 7692 CAATATAAGTTTTTGATTACTACCGCCT 7719 ||||| ||||| || ||||||| ||| Sbjct 261 TAATATTAGTTTCTGGCTACTACCTCCT 234 >seq583 Length=713 Score = 84.2 bits (92), Expect = 5e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 7589 TTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTC 7648 ||||||||||||| | |||||||| | | | || || ||||| || || | ||||| | Sbjct 153 TTATGATTTTCTTCATGGTTATGCCTGCTCTAATGGGTGGTTTTGGTAACTACTTCGTAC 94 Query 7649 CTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGAT 7708 | | ||||||||||| |||||||||||| || | || || || || ||||| || Sbjct 93 CAGTTATGATTGGTGCAGTTGATATGGCTTTCCCTCGACTAAATAACATTAGTTTCTGGC 34 Query 7709 TACTACCGCCT 7719 |||| || ||| Sbjct 33 TACTTCCTCCT 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192505087666046