Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1389 168 1e-36 seq1156 149 1e-30 seq1121 129 1e-24 seq1105 113 9e-20 >seq1389 Length=28264 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | ||| || || |||||||||||||| Sbjct 4303 ACCACCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 4362 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || || || || || ||||||| || |||||||| || Sbjct 4363 GAGGGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGG 4422 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| || || || | ||||| |||||||| | ||||| Sbjct 4423 AATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAGGACTCGAC 4482 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||||||||||||| | ||||| ||||| | ||||| Sbjct 4483 CTCGAGGGTAATCGTCTTACCCGTGAGGGTCTTGACGAACACTTGCAT 4530 >seq1156 Length=36076 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| || || || | |||||| || || |||||||||||||| |||||||||||| Sbjct 1790 CGAAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCA 1731 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| || || || ||||| |||||||| || || ||||| ||||| ||||||||| Sbjct 1730 TCCTCGAGCTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCCGGAGGAATGCCCTCCTTG 1671 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || || | ||| | || || ||||| ||||| | ||||| || ||||||||| Sbjct 1670 TCCTGCACCTTCGACTTCACAACGTCGATCGTGTCGCTCGACTCGACCTCCAGAGTGATC 1611 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || | |||||| | ||| || ||||| Sbjct 1610 GTCTTGCCAGTGAGAGTCTTGATGAAGATTTGCAT 1576 >seq1121 Length=2436 Score = 129 bits (142), Expect = 1e-24 Identities = 578/893 (65%), Gaps = 46/893 (5%) Strand=Plus/Minus Query 229536 TTCCCTATTCAATACCCCGACCTCTGGGATATGTATAAGAAGGCGGTGGCAACCTTTTGG 229595 ||||| || | |||| ||| ||||| | ||||| |||||||||| ||| |||| ||| Sbjct 1040 TTCCCCATCCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCGGAGGCGTCCTTCTGG 981 Query 229596 ACCACGGAGGAAGTCCCCCTAAATGCA--GACGTCGTCGACTGGCGCGAGAAACTCAACG 229653 ||| | |||||| | ||| | || ||| | ||||||| | | || | | Sbjct 980 ACCGCCGAGGAAATTGACCTG--TCCAAGGACCTGCACGACTGGGACCACCGCCTGACGG 923 Query 229654 ACGATGAACGCCATTTCATCAAGCACATTCTCGGGTTTTTTGCAGGTTCCGACGGTATCG 229713 || |||| ||||| || |||| ||| | || | ||| ||||| | || |||||||||| Sbjct 922 ACAATGAGCGCCACTTTATCAGCCACGTCCTTGCGTTCTTTGCGGCGTCGGACGGTATCG 863 Query 229714 TGATGGAAAACTTGCAGACTA--ACTTCAGCGTCGAAGTAACGGTCCCAGAGGCACGGCA 229771 ||| || ||| || | | | ||| |||| ||| || || | | ||||| || Sbjct 862 TGAACGAGAACCTG--GTCGAGCGCTTTAGCGCCGAGGTGCAGGCCGCCGAGGCGCGCTG 805 Query 229772 GTTTTACGCATACCAGACGTTCAATGAATCTGTTCATTCGGAACAGTATGCCCTTCTTAT 229831 || |||| | ||||| | | ||| | || ||||| || | || ||||| Sbjct 804 CTTCTACGGTTTCCAGATCATGATTGAGAACATCCACTCGGAGACCTACTCGCTCCTTAT 745 Query 229832 TGACGCGCTCATTTCCGACGAG--CGAG-AGCGTGCCGAACTGTTCGACGCCATCGAAAA 229888 ||| || || |||| |||| |||| |||| | | ||||| | |||||||| | Sbjct 744 CGACACGTACA--TCCG-CGAGCCCGAGCAGCGCGACTTTTTGTTCAATGCCATCGAGAC 688 Query 229889 CATCCCGGCGGTCCATAACAAAGCGCGTTGGGCTCAGAAGTGGCTGGAACCCAGTAAA-- 229946 |||||||| ||| | | || || ||||| | | |||||| | | || Sbjct 687 CATCCCGGTGGTGAAGCAAAAGGCCGAGTGGGCGCTG----CGCTGGATCAGCGACAAGC 632 Query 229947 -----TCGTTTGCAGAGCGTCTCGTCGCGTGGGTGTGCGTTGAGGGTATTCTGTTCTCCG 230001 ||||| | |||||||| || |||| | ||||||||| || | |||| || Sbjct 631 GCGCCTCGTTCTCGGAGCGTCTTGTGGCGTTTGCCGCCGTTGAGGGCATCTTCTTCT-CG 573 Query 230002 GGAGTTTCTGCG-CCATCTTTTGGCTACGCAACAAG---GGCGTCATGCCCGGGCTCGGT 230057 || | |||| ||||||||||||| || ||| ||| | |||||||| || | Sbjct 572 GGCTCGTTTGCGTCCATCTTTTGGCT---GAAGAAGCGCGGCCTGATGCCCGGCCTGTCT 516 Query 230058 CTGTCGAACGAATTCATCAGCAGGGACGAAGGTCTTCACCAGCAATTTG---GCGAGGTC 230114 | |||||||| |||| | | ||||| || || ||| | |||| || | || Sbjct 515 TTCTCGAACGAGCTCATTTCCCGCGACGAGGGCCTGCACACCGACTTTGCGTGCCTGCTC 456 Query 230115 TTGTATTCGAAGCTAAATAA-CAAAC-TACCTTTCGAAACGGTGAAACAAATCGTCACAG 230172 || || | | || || || | | ||| ||| |||||||| | ||| | || | Sbjct 455 TT-TAGCC--ACCTGAAGAAGCGCGCGCACC--CCGACACGGTGAACCGGATCATTACCG 401 Query 230173 AAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTAT-TCCTTGCCGTCTTATCGGC 230231 | | || | | || |||| || | | |||||| | || || || || || ||| Sbjct 400 AGGCCGTCTCGATCGAGCAGGACTTTTTGTCCGACGCGCTGCCCGTGTCG-CTGATTGGC 342 Query 230232 ATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCG 230291 ||||| || || ||| | || || || || || || || || || | | |||||| Sbjct 341 ATGAACGCGCGCCTGATGTGCCAGTACATTGAGTTTGTTGCGGACCGCCTGCTTGTGGCG 282 Query 230292 CTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCA 230351 || || || ||| || ||| ||| ||||||||||| ||||||||| |||||| Sbjct 281 CTCGGCAACCCGAAGCACTACAACGCCACGAACCCCTTCGACTTTATGGAGAACATTTCG 222 Query 230352 CTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTAT-CAAAGGC 230403 || ||||| || | ||||| ||||| || ||| |||| ||| | ||||| Sbjct 221 CTGCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTCGGCGACTATGCCAAGGC 169 >seq1105 Length=2600 Score = 113 bits (124), Expect = 9e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || || || || || | ||| || || |||||||||||||| Sbjct 1751 CCGCCACGCAGCCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 1810 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || ||||||||||| | || || ||||| ||| Sbjct 1811 AGCGTGCGTCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGCGGG 1870 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTAC 283024 || ||||||||||| |||||||||||||| || Sbjct 1871 ATGCCCTCCTTGTCCTGGATCTTTGCTTTCAC 1902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046716280009686