Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1156 145 5e-30 seq1389 138 8e-28 seq1105 82.4 5e-11 >seq1156 Length=36076 Score = 145 bits (160), Expect = 5e-30 Identities = 161/213 (76%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| |||||||||||||| ||||||||||| ||| || ||| | || || Sbjct 1785 CACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTC 1726 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| |||||||| |||||||| || | ||| | || ||||| ||| Sbjct 1725 GAGCTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTG 1666 Query 44248 TATCTTCTGCTTCA--ATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 | |||| ||||| | || | || |||||| || || ||||||| || |||||| Sbjct 1665 CACCTTCGACTTCACAACGT--CGATCGTGTCGCTCGACTCGACCTCCAGAGTGATCGTC 1608 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || ||||| ||||| | ||||||||||||| Sbjct 1607 TTGCCAGTGAGAGTCTTGATGAAGATTTGCATG 1575 >seq1389 Length=28264 Score = 138 bits (152), Expect = 8e-28 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| ||||| |||||| ||||||||||| ||| ||| || |||| || Sbjct 4321 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCCTC 4380 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || ||||||| ||||| || || | ||| | || ||||| ||| Sbjct 4381 GAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 4440 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | |||||||| | ||| || ||||| | ||||||||||| Sbjct 4441 GATCTTGGCCTTCACATTCTCGATGGTGTCCGAGGACTCGACCTCGAGGGTAATCGTCTT 4500 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||||||| ||||| | ||||||| Sbjct 4501 ACCCGTGAGGGTCTTGACGAACACTTGCATG 4531 >seq1105 Length=2600 Score = 82.4 bits (90), Expect = 5e-11 Identities = 98/132 (74%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| ||||| |||||| ||||||||||| ||| || ||| |||| || Sbjct 1768 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGTCCGTCCTC 1827 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||||||||| | |||||||| || | || | || ||||| ||| Sbjct 1828 GAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 1887 Query 44248 TATCTTCTGCTT 44259 ||||| ||||| Sbjct 1888 GATCTT-TGCTT 1898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359982901962453