Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1389 141 2e-28 seq1156 107 5e-18 seq1105 102 2e-16 >seq1389 Length=28264 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | ||||| || || ||||| || || ||||| ||||||||||| || ||| ||| Sbjct 4527 CAAGTGTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTCGAGGTCGAGTCCTCGGAC 4468 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| || || ||||| |||||||| || || || ||||||||||| || Sbjct 4467 ACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAG 4408 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||| || || | || || ||| || ||| || Sbjct 4407 CGCCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGTACCCTCAGCGACTACAACATC 4348 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| || || Sbjct 4347 CAGAAGGAGTCGACGCTGCACCTCGT 4322 >seq1156 Length=36076 Score = 107 bits (118), Expect = 5e-18 Identities = 150/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| ||| | || |||||||| || || |||||||| || ||||| || ||| Sbjct 1579 CAAATCTTCATCAAGACTCTCACTGGCAAGACGATCACTCTGGAGGTCGAGTCGAGC--- 1635 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||| || || ||| | |||||||| || || || |||||||||||| Sbjct 1636 GACACGATCGACGTTGTGAAGTCGAAGGTGCAGGACAAGGAGGGCATTCCTCCGGACCAG 1695 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || | ||||||||||| || |||||||| ||||| | || || ||| || ||| Sbjct 1696 CAGCGGTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTGAGCGACTACAAC 1755 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || ||||| Sbjct 1756 ATCCAGAAGGAGAGCACGCTCCACCTTGT 1784 >seq1105 Length=2600 Score = 102 bits (112), Expect = 2e-16 Identities = 154/226 (68%), Gaps = 26/226 (12%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 || ||||| || || || || || |||||||||||||||||||| ||| || || ||| Sbjct 1994 TTTGTGAAGACGCTTACTGGCAAGACGATCACCCTCGAGGTGGAGAGCAGCGATACGATC 1935 Query 177990 GAGAACG--------------------------TCAAACAAAAGATTCAGGACAAAGAAG 178023 ||||| | | ||| |||||| |||||||| || | Sbjct 1934 GAGAATGGTGCGTGCGCCACCGCGCTGACCCAGTGAAAGCAAAGATCCAGGACAAGGAGG 1875 Query 178024 GAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGA 178083 | ||||| ||||||||||| || || ||||| ||||| || |||||||| || ||| | | Sbjct 1874 GCATCCCGCCGGACCAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGACGCA 1815 Query 178084 CTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | || ||| || ||| |||| || || || || ||||| || || Sbjct 1814 CGCTGAGCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTCGT 1769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203704842424546