Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1156 159 3e-34 seq1389 154 1e-32 seq1105 125 7e-24 >seq1156 Length=36076 Score = 159 bits (176), Expect = 3e-34 Identities = 164/212 (77%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || ||||||||||||||||| ||||| |||||| || ||||| | || || Sbjct 1785 CACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTC 1726 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||||||||||||| |||| ||||| ||||||| |||| || |||||||||| Sbjct 1725 GAGCTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTG 1666 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 | || |||| || ||| | | |||||||||||||| ||||||| || ||||| | Sbjct 1665 CACCTTCGACTTC-ACAACGTCGATCGTGTCGCTCGACTCGACCTCCAGAGTGATCGTCT 1607 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || || || ||||| | ||| || |||||| Sbjct 1606 TGCCAGTGAGAGTCTTGATGAAGATTTGCATG 1575 >seq1389 Length=28264 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || |||||||| ||||||||| ||||| |||||| | Sbjct 4304 CCACCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTG 4363 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| ||||||||||| || ||||| ||||||||||||||||||| ||| Sbjct 4364 AGGGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGA 4423 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || |||||||||| ||| || ||||| | | ||||| ||||| ||| Sbjct 4424 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAGGACTCGACC 4483 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || | || ||||| |||||||| || ||||| ||||| | |||||| Sbjct 4484 TCGAGGGTAATCGTCTTACCCGTGAGGGTCTTGACGAACACTTGCATG 4531 >seq1105 Length=2600 Score = 125 bits (138), Expect = 7e-24 Identities = 119/151 (79%), Gaps = 1/151 (1%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 ||||||| || || || | ||| || |||||||| ||||||||| ||||| |||||| Sbjct 1749 CGCCGCCACGCAGCCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGC 1808 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 || ||||| |||| ||||||||||||||||| || || |||||||| ||||||| | Sbjct 1809 TCAGCGTGCGTCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGCG 1868 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTT 41784 | | || |||||||||| || | ||||||| Sbjct 1869 GGATGCCCTCCTTGTCC-TGGATCTTTGCTT 1898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462294124030800